Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC21.41■■□□□ 1.02
Shroom1Q5SX79 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Shroom1Q5SX79 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC21.4■■□□□ 1.02
Shroom1Q5SX79 Gm7160-202ENSMUST00000188519 1027 ntBASIC21.4■■□□□ 1.02
Shroom1Q5SX79 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC21.4■■□□□ 1.02
Shroom1Q5SX79 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Shroom1Q5SX79 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Shroom1Q5SX79 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Shroom1Q5SX79 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.4■■□□□ 1.02
Shroom1Q5SX79 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Shroom1Q5SX79 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Shroom1Q5SX79 Hsf1-207ENSMUST00000228371 2102 ntBASIC21.4■■□□□ 1.02
Shroom1Q5SX79 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Shroom1Q5SX79 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Shroom1Q5SX79 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
Shroom1Q5SX79 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Shroom1Q5SX79 Spcs1-204ENSMUST00000226782 949 ntBASIC21.39■■□□□ 1.01
Shroom1Q5SX79 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Shroom1Q5SX79 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
Shroom1Q5SX79 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Shroom1Q5SX79 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Shroom1Q5SX79 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Shroom1Q5SX79 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC21.38■■□□□ 1.01
Shroom1Q5SX79 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Shroom1Q5SX79 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Shroom1Q5SX79 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Shroom1Q5SX79 Gm6085-201ENSMUST00000182774 1470 ntBASIC21.38■■□□□ 1.01
Shroom1Q5SX79 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Shroom1Q5SX79 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Shroom1Q5SX79 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Shroom1Q5SX79 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Shroom1Q5SX79 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC21.37■■□□□ 1.01
Shroom1Q5SX79 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC21.37■■□□□ 1.01
Shroom1Q5SX79 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Shroom1Q5SX79 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Shroom1Q5SX79 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Shroom1Q5SX79 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Shroom1Q5SX79 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Shroom1Q5SX79 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC21.36■■□□□ 1.01
Shroom1Q5SX79 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Shroom1Q5SX79 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Shroom1Q5SX79 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Shroom1Q5SX79 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC21.36■■□□□ 1.01
Shroom1Q5SX79 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Shroom1Q5SX79 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Shroom1Q5SX79 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Shroom1Q5SX79 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Shroom1Q5SX79 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Shroom1Q5SX79 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Shroom1Q5SX79 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Shroom1Q5SX79 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC21.35■■□□□ 1.01
Shroom1Q5SX79 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Shroom1Q5SX79 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Shroom1Q5SX79 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Shroom1Q5SX79 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Shroom1Q5SX79 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Shroom1Q5SX79 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC21.34■■□□□ 1.01
Shroom1Q5SX79 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC21.34■■□□□ 1.01
Shroom1Q5SX79 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Shroom1Q5SX79 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Shroom1Q5SX79 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Shroom1Q5SX79 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Shroom1Q5SX79 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Shroom1Q5SX79 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Shroom1Q5SX79 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Shroom1Q5SX79 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC21.34■■□□□ 1.01
Shroom1Q5SX79 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Shroom1Q5SX79 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Shroom1Q5SX79 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Shroom1Q5SX79 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Shroom1Q5SX79 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Shroom1Q5SX79 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Shroom1Q5SX79 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Shroom1Q5SX79 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC21.33■■□□□ 1.01
Shroom1Q5SX79 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Shroom1Q5SX79 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Shroom1Q5SX79 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Shroom1Q5SX79 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC21.32■■□□□ 1
Shroom1Q5SX79 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Shroom1Q5SX79 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC21.32■■□□□ 1
Shroom1Q5SX79 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Shroom1Q5SX79 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC21.32■■□□□ 1
Shroom1Q5SX79 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC21.32■■□□□ 1
Shroom1Q5SX79 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Shroom1Q5SX79 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC21.32■■□□□ 1
Shroom1Q5SX79 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC21.32■■□□□ 1
Shroom1Q5SX79 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Shroom1Q5SX79 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Shroom1Q5SX79 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Shroom1Q5SX79 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Shroom1Q5SX79 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Shroom1Q5SX79 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC21.31■■□□□ 1
Shroom1Q5SX79 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Shroom1Q5SX79 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Shroom1Q5SX79 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Shroom1Q5SX79 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Shroom1Q5SX79 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Shroom1Q5SX79 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC21.31■■□□□ 1
Shroom1Q5SX79 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Shroom1Q5SX79 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms