Protein–RNA interactions for Protein: Q4VBF2

R3hdm4, R3H domain-containing protein 4, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4Q4VBF2 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
R3hdm4Q4VBF2 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
R3hdm4Q4VBF2 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC21.79■■□□□ 1.08
R3hdm4Q4VBF2 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
R3hdm4Q4VBF2 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
R3hdm4Q4VBF2 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
R3hdm4Q4VBF2 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
R3hdm4Q4VBF2 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
R3hdm4Q4VBF2 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
R3hdm4Q4VBF2 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
R3hdm4Q4VBF2 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
R3hdm4Q4VBF2 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
R3hdm4Q4VBF2 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
R3hdm4Q4VBF2 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC21.77■■□□□ 1.08
R3hdm4Q4VBF2 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC21.77■■□□□ 1.08
R3hdm4Q4VBF2 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
R3hdm4Q4VBF2 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
R3hdm4Q4VBF2 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
R3hdm4Q4VBF2 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.07
R3hdm4Q4VBF2 AC152827.1-201ENSMUST00000221143 2189 ntBASIC21.77■■□□□ 1.07
R3hdm4Q4VBF2 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
R3hdm4Q4VBF2 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC21.76■■□□□ 1.07
R3hdm4Q4VBF2 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
R3hdm4Q4VBF2 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
R3hdm4Q4VBF2 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
R3hdm4Q4VBF2 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
R3hdm4Q4VBF2 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
R3hdm4Q4VBF2 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC21.75■■□□□ 1.07
R3hdm4Q4VBF2 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
R3hdm4Q4VBF2 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
R3hdm4Q4VBF2 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
R3hdm4Q4VBF2 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
R3hdm4Q4VBF2 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
R3hdm4Q4VBF2 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
R3hdm4Q4VBF2 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
R3hdm4Q4VBF2 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
R3hdm4Q4VBF2 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
R3hdm4Q4VBF2 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
R3hdm4Q4VBF2 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
R3hdm4Q4VBF2 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
R3hdm4Q4VBF2 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC21.74■■□□□ 1.07
R3hdm4Q4VBF2 Gm43759-201ENSMUST00000196925 1261 ntBASIC21.74■■□□□ 1.07
R3hdm4Q4VBF2 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC21.74■■□□□ 1.07
R3hdm4Q4VBF2 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
R3hdm4Q4VBF2 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
R3hdm4Q4VBF2 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
R3hdm4Q4VBF2 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
R3hdm4Q4VBF2 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
R3hdm4Q4VBF2 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
R3hdm4Q4VBF2 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
R3hdm4Q4VBF2 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
R3hdm4Q4VBF2 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC21.73■■□□□ 1.07
R3hdm4Q4VBF2 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
R3hdm4Q4VBF2 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC21.72■■□□□ 1.07
R3hdm4Q4VBF2 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
R3hdm4Q4VBF2 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
R3hdm4Q4VBF2 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
R3hdm4Q4VBF2 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
R3hdm4Q4VBF2 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
R3hdm4Q4VBF2 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
R3hdm4Q4VBF2 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
R3hdm4Q4VBF2 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
R3hdm4Q4VBF2 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
R3hdm4Q4VBF2 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
R3hdm4Q4VBF2 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
R3hdm4Q4VBF2 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC21.71■■□□□ 1.07
R3hdm4Q4VBF2 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC21.71■■□□□ 1.07
R3hdm4Q4VBF2 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
R3hdm4Q4VBF2 Hsf1-207ENSMUST00000228371 2102 ntBASIC21.71■■□□□ 1.07
R3hdm4Q4VBF2 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC21.71■■□□□ 1.07
R3hdm4Q4VBF2 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC21.71■■□□□ 1.07
R3hdm4Q4VBF2 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
R3hdm4Q4VBF2 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
R3hdm4Q4VBF2 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
R3hdm4Q4VBF2 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
R3hdm4Q4VBF2 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
R3hdm4Q4VBF2 Mir6236-201ENSMUST00000184437 123 ntBASIC21.7■■□□□ 1.06
R3hdm4Q4VBF2 Gm27454-201ENSMUST00000185090 204 ntBASIC21.7■■□□□ 1.06
R3hdm4Q4VBF2 Gm43137-201ENSMUST00000198052 594 ntBASIC21.7■■□□□ 1.06
R3hdm4Q4VBF2 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
R3hdm4Q4VBF2 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
R3hdm4Q4VBF2 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
R3hdm4Q4VBF2 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
R3hdm4Q4VBF2 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
R3hdm4Q4VBF2 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
R3hdm4Q4VBF2 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
R3hdm4Q4VBF2 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
R3hdm4Q4VBF2 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC21.69■■□□□ 1.06
R3hdm4Q4VBF2 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC21.69■■□□□ 1.06
R3hdm4Q4VBF2 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
R3hdm4Q4VBF2 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
R3hdm4Q4VBF2 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
R3hdm4Q4VBF2 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
R3hdm4Q4VBF2 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
R3hdm4Q4VBF2 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.68■■□□□ 1.06
R3hdm4Q4VBF2 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC21.68■■□□□ 1.06
R3hdm4Q4VBF2 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC21.68■■□□□ 1.06
R3hdm4Q4VBF2 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC21.68■■□□□ 1.06
R3hdm4Q4VBF2 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
R3hdm4Q4VBF2 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms