Protein–RNA interactions for Protein: Q3U435

Mmp25, Matrix metalloproteinase-25, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp25Q3U435 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Mmp25Q3U435 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Mmp25Q3U435 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Mmp25Q3U435 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Mmp25Q3U435 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Mmp25Q3U435 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Mmp25Q3U435 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Mmp25Q3U435 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Mmp25Q3U435 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Mmp25Q3U435 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Mmp25Q3U435 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Mmp25Q3U435 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Mmp25Q3U435 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Mmp25Q3U435 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Mmp25Q3U435 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Mmp25Q3U435 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Mmp25Q3U435 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.95■□□□□ 0.62
Mmp25Q3U435 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Mmp25Q3U435 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Mmp25Q3U435 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Mmp25Q3U435 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Mmp25Q3U435 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.94■□□□□ 0.62
Mmp25Q3U435 Gm27454-201ENSMUST00000185090 204 ntBASIC18.94■□□□□ 0.62
Mmp25Q3U435 Gm43137-201ENSMUST00000198052 594 ntBASIC18.94■□□□□ 0.62
Mmp25Q3U435 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC18.94■□□□□ 0.62
Mmp25Q3U435 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.94■□□□□ 0.62
Mmp25Q3U435 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Mmp25Q3U435 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Mmp25Q3U435 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Mmp25Q3U435 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Mmp25Q3U435 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Mmp25Q3U435 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Mmp25Q3U435 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.94■□□□□ 0.62
Mmp25Q3U435 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Mmp25Q3U435 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Mmp25Q3U435 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Mmp25Q3U435 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.93■□□□□ 0.62
Mmp25Q3U435 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.93■□□□□ 0.62
Mmp25Q3U435 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Mmp25Q3U435 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.93■□□□□ 0.62
Mmp25Q3U435 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Mmp25Q3U435 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Mmp25Q3U435 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Mmp25Q3U435 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Mmp25Q3U435 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.92■□□□□ 0.62
Mmp25Q3U435 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Mmp25Q3U435 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.92■□□□□ 0.62
Mmp25Q3U435 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Mmp25Q3U435 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Mmp25Q3U435 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Mmp25Q3U435 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Mmp25Q3U435 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Mmp25Q3U435 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Mmp25Q3U435 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Mmp25Q3U435 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Mmp25Q3U435 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Mmp25Q3U435 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.91■□□□□ 0.62
Mmp25Q3U435 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Mmp25Q3U435 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Mmp25Q3U435 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Mmp25Q3U435 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Mmp25Q3U435 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.91■□□□□ 0.62
Mmp25Q3U435 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Mmp25Q3U435 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Mmp25Q3U435 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Mmp25Q3U435 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
Mmp25Q3U435 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Mmp25Q3U435 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Mmp25Q3U435 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Mmp25Q3U435 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Mmp25Q3U435 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Mmp25Q3U435 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Mmp25Q3U435 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Mmp25Q3U435 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
Mmp25Q3U435 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Mmp25Q3U435 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Mmp25Q3U435 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Mmp25Q3U435 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Mmp25Q3U435 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Mmp25Q3U435 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.89■□□□□ 0.61
Mmp25Q3U435 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.89■□□□□ 0.61
Mmp25Q3U435 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Mmp25Q3U435 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Mmp25Q3U435 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Mmp25Q3U435 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Mmp25Q3U435 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Mmp25Q3U435 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Mmp25Q3U435 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Mmp25Q3U435 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Mmp25Q3U435 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Mmp25Q3U435 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.88■□□□□ 0.61
Mmp25Q3U435 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Mmp25Q3U435 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Mmp25Q3U435 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Mmp25Q3U435 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Mmp25Q3U435 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Mmp25Q3U435 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Mmp25Q3U435 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Mmp25Q3U435 Gm45417-201ENSMUST00000209533 758 ntBASIC18.87■□□□□ 0.61
Mmp25Q3U435 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms