Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Gm10653-202ENSMUST00000139570 835 ntBASIC18.64■□□□□ 0.58
Cacna1aP97445 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.64■□□□□ 0.58
Cacna1aP97445 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Cacna1aP97445 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Cacna1aP97445 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cacna1aP97445 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cacna1aP97445 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.64■□□□□ 0.57
Cacna1aP97445 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cacna1aP97445 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cacna1aP97445 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cacna1aP97445 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Cacna1aP97445 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cacna1aP97445 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.63■□□□□ 0.57
Cacna1aP97445 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Cacna1aP97445 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cacna1aP97445 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Cacna1aP97445 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cacna1aP97445 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cacna1aP97445 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cacna1aP97445 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cacna1aP97445 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC18.62■□□□□ 0.57
Cacna1aP97445 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cacna1aP97445 Gm11421-201ENSMUST00000122124 294 ntBASIC18.62■□□□□ 0.57
Cacna1aP97445 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Cacna1aP97445 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.62■□□□□ 0.57
Cacna1aP97445 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cacna1aP97445 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cacna1aP97445 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cacna1aP97445 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cacna1aP97445 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.61■□□□□ 0.57
Cacna1aP97445 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.61■□□□□ 0.57
Cacna1aP97445 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.61■□□□□ 0.57
Cacna1aP97445 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.61■□□□□ 0.57
Cacna1aP97445 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cacna1aP97445 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.61■□□□□ 0.57
Cacna1aP97445 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Cacna1aP97445 AC153962.1-201ENSMUST00000218530 1948 ntBASIC18.6■□□□□ 0.57
Cacna1aP97445 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cacna1aP97445 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cacna1aP97445 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Cacna1aP97445 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cacna1aP97445 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC18.6■□□□□ 0.57
Cacna1aP97445 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cacna1aP97445 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.6■□□□□ 0.57
Cacna1aP97445 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Cacna1aP97445 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cacna1aP97445 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18.6■□□□□ 0.57
Cacna1aP97445 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cacna1aP97445 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.59■□□□□ 0.57
Cacna1aP97445 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC18.59■□□□□ 0.57
Cacna1aP97445 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cacna1aP97445 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cacna1aP97445 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cacna1aP97445 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cacna1aP97445 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cacna1aP97445 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cacna1aP97445 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
Cacna1aP97445 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.57
Cacna1aP97445 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cacna1aP97445 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cacna1aP97445 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cacna1aP97445 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cacna1aP97445 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cacna1aP97445 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cacna1aP97445 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cacna1aP97445 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.57■□□□□ 0.56
Cacna1aP97445 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cacna1aP97445 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cacna1aP97445 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cacna1aP97445 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cacna1aP97445 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cacna1aP97445 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cacna1aP97445 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.57■□□□□ 0.56
Cacna1aP97445 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cacna1aP97445 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cacna1aP97445 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cacna1aP97445 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cacna1aP97445 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Cacna1aP97445 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cacna1aP97445 Il17rd-202ENSMUST00000223942 2186 ntBASIC18.56■□□□□ 0.56
Cacna1aP97445 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.56■□□□□ 0.56
Cacna1aP97445 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cacna1aP97445 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.56■□□□□ 0.56
Cacna1aP97445 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC18.56■□□□□ 0.56
Cacna1aP97445 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cacna1aP97445 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.55■□□□□ 0.56
Cacna1aP97445 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.55■□□□□ 0.56
Cacna1aP97445 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.55■□□□□ 0.56
Cacna1aP97445 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.55■□□□□ 0.56
Cacna1aP97445 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cacna1aP97445 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.55■□□□□ 0.56
Cacna1aP97445 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC18.55■□□□□ 0.56
Cacna1aP97445 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cacna1aP97445 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.55■□□□□ 0.56
Cacna1aP97445 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cacna1aP97445 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cacna1aP97445 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cacna1aP97445 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cacna1aP97445 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cacna1aP97445 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms