Protein–RNA interactions for Protein: P97291

Cdh8, Cadherin-8, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh8P97291 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Cdh8P97291 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Cdh8P97291 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.36■■□□□ 1.01
Cdh8P97291 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Cdh8P97291 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cdh8P97291 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cdh8P97291 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC21.35■■□□□ 1.01
Cdh8P97291 Gm27454-201ENSMUST00000185090 204 ntBASIC21.35■■□□□ 1.01
Cdh8P97291 Gm43759-201ENSMUST00000196925 1261 ntBASIC21.35■■□□□ 1.01
Cdh8P97291 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Cdh8P97291 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Cdh8P97291 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cdh8P97291 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cdh8P97291 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cdh8P97291 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cdh8P97291 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cdh8P97291 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Cdh8P97291 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cdh8P97291 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cdh8P97291 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC21.34■■□□□ 1.01
Cdh8P97291 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC21.34■■□□□ 1.01
Cdh8P97291 Appbp2os-202ENSMUST00000206972 447 ntBASIC21.34■■□□□ 1.01
Cdh8P97291 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Cdh8P97291 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cdh8P97291 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cdh8P97291 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cdh8P97291 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Cdh8P97291 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cdh8P97291 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Cdh8P97291 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Cdh8P97291 Gm43137-201ENSMUST00000198052 594 ntBASIC21.33■■□□□ 1.01
Cdh8P97291 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Cdh8P97291 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Cdh8P97291 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC21.33■■□□□ 1
Cdh8P97291 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Cdh8P97291 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC21.32■■□□□ 1
Cdh8P97291 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC21.32■■□□□ 1
Cdh8P97291 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cdh8P97291 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC21.32■■□□□ 1
Cdh8P97291 Gm12821-201ENSMUST00000120022 600 ntBASIC21.32■■□□□ 1
Cdh8P97291 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Cdh8P97291 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC21.32■■□□□ 1
Cdh8P97291 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Cdh8P97291 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Cdh8P97291 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Cdh8P97291 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC21.32■■□□□ 1
Cdh8P97291 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC21.31■■□□□ 1
Cdh8P97291 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC21.31■■□□□ 1
Cdh8P97291 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC21.31■■□□□ 1
Cdh8P97291 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cdh8P97291 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC21.31■■□□□ 1
Cdh8P97291 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cdh8P97291 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cdh8P97291 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cdh8P97291 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cdh8P97291 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cdh8P97291 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC21.3■■□□□ 1
Cdh8P97291 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC21.3■■□□□ 1
Cdh8P97291 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cdh8P97291 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC21.3■■□□□ 1
Cdh8P97291 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cdh8P97291 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Cdh8P97291 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cdh8P97291 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cdh8P97291 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Cdh8P97291 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cdh8P97291 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cdh8P97291 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC21.29■■□□□ 1
Cdh8P97291 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC21.29■■□□□ 1
Cdh8P97291 Gm45417-201ENSMUST00000209533 758 ntBASIC21.29■■□□□ 1
Cdh8P97291 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC21.29■■□□□ 1
Cdh8P97291 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cdh8P97291 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cdh8P97291 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC21.29■■□□□ 1
Cdh8P97291 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC21.29■■□□□ 1
Cdh8P97291 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Cdh8P97291 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC21.28■■□□□ 1
Cdh8P97291 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cdh8P97291 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cdh8P97291 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cdh8P97291 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cdh8P97291 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC21.27■■□□□ 1
Cdh8P97291 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC21.27■■□□□ 1
Cdh8P97291 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cdh8P97291 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC21.27■■□□□ 1
Cdh8P97291 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC21.27■■□□□ 1
Cdh8P97291 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cdh8P97291 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cdh8P97291 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC21.27■■□□□ 1
Cdh8P97291 Gm37035-201ENSMUST00000194809 2148 ntBASIC21.27■■□□□ 1
Cdh8P97291 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC21.27■■□□□ 1
Cdh8P97291 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC21.27■■□□□ 1
Cdh8P97291 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Cdh8P97291 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Cdh8P97291 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cdh8P97291 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cdh8P97291 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cdh8P97291 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC21.26■□□□□ 0.99
Cdh8P97291 Mir6236-201ENSMUST00000184437 123 ntBASIC21.26■□□□□ 0.99
Cdh8P97291 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC21.26■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms