Protein–RNA interactions for Protein: P55284

Cdh5, Cadherin-5, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh5P55284 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.47■□□□□ 0.71
Cdh5P55284 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.47■□□□□ 0.71
Cdh5P55284 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cdh5P55284 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Cdh5P55284 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cdh5P55284 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cdh5P55284 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.47■□□□□ 0.71
Cdh5P55284 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cdh5P55284 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cdh5P55284 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cdh5P55284 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cdh5P55284 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Cdh5P55284 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cdh5P55284 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cdh5P55284 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cdh5P55284 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cdh5P55284 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cdh5P55284 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cdh5P55284 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.45■□□□□ 0.7
Cdh5P55284 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cdh5P55284 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.45■□□□□ 0.7
Cdh5P55284 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Cdh5P55284 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Cdh5P55284 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cdh5P55284 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.45■□□□□ 0.7
Cdh5P55284 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cdh5P55284 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.45■□□□□ 0.7
Cdh5P55284 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cdh5P55284 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.44■□□□□ 0.7
Cdh5P55284 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.44■□□□□ 0.7
Cdh5P55284 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cdh5P55284 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cdh5P55284 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.44■□□□□ 0.7
Cdh5P55284 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Cdh5P55284 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cdh5P55284 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cdh5P55284 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cdh5P55284 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cdh5P55284 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cdh5P55284 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cdh5P55284 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cdh5P55284 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.43■□□□□ 0.7
Cdh5P55284 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cdh5P55284 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cdh5P55284 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cdh5P55284 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.43■□□□□ 0.7
Cdh5P55284 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.42■□□□□ 0.7
Cdh5P55284 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Cdh5P55284 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cdh5P55284 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cdh5P55284 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.42■□□□□ 0.7
Cdh5P55284 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.42■□□□□ 0.7
Cdh5P55284 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cdh5P55284 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cdh5P55284 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Cdh5P55284 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cdh5P55284 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cdh5P55284 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.42■□□□□ 0.7
Cdh5P55284 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cdh5P55284 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Cdh5P55284 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cdh5P55284 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cdh5P55284 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
Cdh5P55284 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.41■□□□□ 0.7
Cdh5P55284 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.41■□□□□ 0.7
Cdh5P55284 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cdh5P55284 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Cdh5P55284 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cdh5P55284 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Cdh5P55284 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cdh5P55284 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.4■□□□□ 0.7
Cdh5P55284 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cdh5P55284 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cdh5P55284 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.4■□□□□ 0.7
Cdh5P55284 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cdh5P55284 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
Cdh5P55284 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.4■□□□□ 0.7
Cdh5P55284 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Cdh5P55284 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cdh5P55284 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cdh5P55284 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Cdh5P55284 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Cdh5P55284 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cdh5P55284 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
Cdh5P55284 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cdh5P55284 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cdh5P55284 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.39■□□□□ 0.69
Cdh5P55284 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cdh5P55284 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.39■□□□□ 0.69
Cdh5P55284 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cdh5P55284 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cdh5P55284 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cdh5P55284 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cdh5P55284 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cdh5P55284 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cdh5P55284 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cdh5P55284 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cdh5P55284 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cdh5P55284 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cdh5P55284 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 381.7 ms