Protein–RNA interactions for Protein: P41230

Kdm5c, Lysine-specific demethylase 5C, mousemouse

Predictions only

Length 1,554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm5cP41230 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC29.86■■■□□ 2.37
Kdm5cP41230 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
Kdm5cP41230 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC29.86■■■□□ 2.37
Kdm5cP41230 Gm27801-201ENSMUST00000184174 223 ntBASIC29.86■■■□□ 2.37
Kdm5cP41230 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC29.86■■■□□ 2.37
Kdm5cP41230 Gm44949-201ENSMUST00000206423 1450 ntBASIC29.86■■■□□ 2.37
Kdm5cP41230 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC29.86■■■□□ 2.37
Kdm5cP41230 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC29.85■■■□□ 2.37
Kdm5cP41230 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
Kdm5cP41230 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
Kdm5cP41230 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
Kdm5cP41230 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC29.84■■■□□ 2.37
Kdm5cP41230 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC29.84■■■□□ 2.37
Kdm5cP41230 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
Kdm5cP41230 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
Kdm5cP41230 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
Kdm5cP41230 Gm42555-201ENSMUST00000199304 1039 ntBASIC29.83■■■□□ 2.37
Kdm5cP41230 Gm9988-201ENSMUST00000069786 435 ntBASIC29.83■■■□□ 2.37
Kdm5cP41230 Gm4968-201ENSMUST00000071458 858 ntBASIC29.83■■■□□ 2.37
Kdm5cP41230 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
Kdm5cP41230 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
Kdm5cP41230 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC29.83■■■□□ 2.37
Kdm5cP41230 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
Kdm5cP41230 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
Kdm5cP41230 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC29.82■■■□□ 2.36
Kdm5cP41230 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC29.82■■■□□ 2.36
Kdm5cP41230 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
Kdm5cP41230 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC29.81■■■□□ 2.36
Kdm5cP41230 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC29.81■■■□□ 2.36
Kdm5cP41230 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
Kdm5cP41230 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
Kdm5cP41230 Gm42418-201ENSMUST00000182010 1831 ntBASIC29.81■■■□□ 2.36
Kdm5cP41230 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
Kdm5cP41230 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
Kdm5cP41230 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
Kdm5cP41230 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC29.81■■■□□ 2.36
Kdm5cP41230 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
Kdm5cP41230 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
Kdm5cP41230 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC29.8■■■□□ 2.36
Kdm5cP41230 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC29.8■■■□□ 2.36
Kdm5cP41230 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
Kdm5cP41230 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
Kdm5cP41230 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
Kdm5cP41230 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC29.79■■■□□ 2.36
Kdm5cP41230 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC29.79■■■□□ 2.36
Kdm5cP41230 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC29.79■■■□□ 2.36
Kdm5cP41230 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
Kdm5cP41230 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Kdm5cP41230 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC29.78■■■□□ 2.36
Kdm5cP41230 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
Kdm5cP41230 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC29.78■■■□□ 2.36
Kdm5cP41230 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC29.78■■■□□ 2.36
Kdm5cP41230 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Kdm5cP41230 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Kdm5cP41230 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC29.77■■■□□ 2.36
Kdm5cP41230 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC29.77■■■□□ 2.36
Kdm5cP41230 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
Kdm5cP41230 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
Kdm5cP41230 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
Kdm5cP41230 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
Kdm5cP41230 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC29.77■■■□□ 2.36
Kdm5cP41230 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
Kdm5cP41230 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
Kdm5cP41230 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC29.77■■■□□ 2.36
Kdm5cP41230 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
Kdm5cP41230 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC29.77■■■□□ 2.36
Kdm5cP41230 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.36
Kdm5cP41230 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC29.76■■■□□ 2.36
Kdm5cP41230 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
Kdm5cP41230 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
Kdm5cP41230 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC29.75■■■□□ 2.35
Kdm5cP41230 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Kdm5cP41230 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
Kdm5cP41230 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC29.75■■■□□ 2.35
Kdm5cP41230 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC29.75■■■□□ 2.35
Kdm5cP41230 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC29.75■■■□□ 2.35
Kdm5cP41230 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Kdm5cP41230 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Kdm5cP41230 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC29.75■■■□□ 2.35
Kdm5cP41230 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC29.75■■■□□ 2.35
Kdm5cP41230 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
Kdm5cP41230 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
Kdm5cP41230 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
Kdm5cP41230 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC29.73■■■□□ 2.35
Kdm5cP41230 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC29.73■■■□□ 2.35
Kdm5cP41230 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
Kdm5cP41230 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Kdm5cP41230 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC29.73■■■□□ 2.35
Kdm5cP41230 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
Kdm5cP41230 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC29.73■■■□□ 2.35
Kdm5cP41230 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC29.73■■■□□ 2.35
Kdm5cP41230 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC29.73■■■□□ 2.35
Kdm5cP41230 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC29.73■■■□□ 2.35
Kdm5cP41230 Mir5133-201ENSMUST00000174955 77 ntBASIC29.73■■■□□ 2.35
Kdm5cP41230 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC29.73■■■□□ 2.35
Kdm5cP41230 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Kdm5cP41230 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC29.73■■■□□ 2.35
Kdm5cP41230 Gm12527-201ENSMUST00000117967 564 ntBASIC29.72■■■□□ 2.35
Kdm5cP41230 Gm13148-201ENSMUST00000118892 745 ntBASIC29.72■■■□□ 2.35
Kdm5cP41230 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC29.72■■■□□ 2.35
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms