Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Fen1P39749 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Fen1P39749 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Fen1P39749 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Fen1P39749 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.12■□□□□ 0.81
Fen1P39749 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Fen1P39749 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Fen1P39749 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Fen1P39749 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Fen1P39749 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Fen1P39749 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Fen1P39749 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Fen1P39749 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.11■□□□□ 0.81
Fen1P39749 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
Fen1P39749 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.11■□□□□ 0.81
Fen1P39749 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Fen1P39749 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.11■□□□□ 0.81
Fen1P39749 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Fen1P39749 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Fen1P39749 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Fen1P39749 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Fen1P39749 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Fen1P39749 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Fen1P39749 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Fen1P39749 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Fen1P39749 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Fen1P39749 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Fen1P39749 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Fen1P39749 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Fen1P39749 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Fen1P39749 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.1■□□□□ 0.81
Fen1P39749 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Fen1P39749 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Fen1P39749 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Fen1P39749 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Fen1P39749 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Fen1P39749 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC20.09■□□□□ 0.81
Fen1P39749 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Fen1P39749 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Fen1P39749 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Fen1P39749 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Fen1P39749 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Fen1P39749 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.09■□□□□ 0.81
Fen1P39749 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Fen1P39749 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Fen1P39749 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Fen1P39749 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
Fen1P39749 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.08■□□□□ 0.8
Fen1P39749 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Fen1P39749 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.08■□□□□ 0.8
Fen1P39749 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Fen1P39749 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Fen1P39749 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Fen1P39749 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Fen1P39749 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Fen1P39749 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Fen1P39749 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Fen1P39749 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Fen1P39749 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Fen1P39749 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Fen1P39749 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Fen1P39749 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Fen1P39749 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Fen1P39749 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Fen1P39749 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Fen1P39749 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Fen1P39749 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.06■□□□□ 0.8
Fen1P39749 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
Fen1P39749 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Fen1P39749 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Fen1P39749 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Fen1P39749 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Fen1P39749 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Fen1P39749 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Fen1P39749 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Fen1P39749 Gm10420-201ENSMUST00000121713 882 ntBASIC20.05■□□□□ 0.8
Fen1P39749 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.05■□□□□ 0.8
Fen1P39749 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Fen1P39749 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC20.05■□□□□ 0.8
Fen1P39749 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Fen1P39749 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Fen1P39749 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Fen1P39749 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Fen1P39749 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Fen1P39749 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Fen1P39749 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Fen1P39749 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Fen1P39749 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Fen1P39749 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Fen1P39749 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Fen1P39749 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Fen1P39749 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.04■□□□□ 0.8
Fen1P39749 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC20.04■□□□□ 0.8
Fen1P39749 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC20.04■□□□□ 0.8
Fen1P39749 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Fen1P39749 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Fen1P39749 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Fen1P39749 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Fen1P39749 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Fen1P39749 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms