Protein–RNA interactions for Protein: P35546

Ret, Proto-oncogene tyrosine-protein kinase receptor Ret, mousemouse

Predictions only

Length 1,115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RetP35546 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RetP35546 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RetP35546 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RetP35546 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.79■□□□□ 0.6
RetP35546 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RetP35546 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RetP35546 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RetP35546 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RetP35546 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RetP35546 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RetP35546 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RetP35546 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.79■□□□□ 0.6
RetP35546 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.79■□□□□ 0.6
RetP35546 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RetP35546 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
RetP35546 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RetP35546 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
RetP35546 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RetP35546 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RetP35546 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RetP35546 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.78■□□□□ 0.6
RetP35546 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RetP35546 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RetP35546 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RetP35546 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RetP35546 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.78■□□□□ 0.6
RetP35546 Notumos-201ENSMUST00000151998 2659 ntBASIC18.77■□□□□ 0.6
RetP35546 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RetP35546 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
RetP35546 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
RetP35546 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.77■□□□□ 0.6
RetP35546 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.77■□□□□ 0.6
RetP35546 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.77■□□□□ 0.6
RetP35546 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
RetP35546 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
RetP35546 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.77■□□□□ 0.59
RetP35546 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RetP35546 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
RetP35546 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RetP35546 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
RetP35546 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
RetP35546 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RetP35546 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RetP35546 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RetP35546 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RetP35546 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
RetP35546 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RetP35546 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RetP35546 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RetP35546 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RetP35546 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.75■□□□□ 0.59
RetP35546 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RetP35546 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RetP35546 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
RetP35546 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RetP35546 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RetP35546 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RetP35546 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RetP35546 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
RetP35546 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RetP35546 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RetP35546 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.74■□□□□ 0.59
RetP35546 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RetP35546 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RetP35546 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
RetP35546 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RetP35546 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RetP35546 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RetP35546 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RetP35546 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.73■□□□□ 0.59
RetP35546 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
RetP35546 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RetP35546 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RetP35546 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RetP35546 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
RetP35546 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RetP35546 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RetP35546 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RetP35546 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
RetP35546 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RetP35546 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
RetP35546 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RetP35546 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.72■□□□□ 0.59
RetP35546 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RetP35546 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RetP35546 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RetP35546 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RetP35546 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RetP35546 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
RetP35546 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
RetP35546 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
RetP35546 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RetP35546 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
RetP35546 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RetP35546 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RetP35546 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RetP35546 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
RetP35546 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RetP35546 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
RetP35546 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 83.4 ms