Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tnfrsf1aP25118 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tnfrsf1aP25118 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tnfrsf1aP25118 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Tnfrsf1aP25118 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tnfrsf1aP25118 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tnfrsf1aP25118 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
Tnfrsf1aP25118 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC16.8■□□□□ 0.28
Tnfrsf1aP25118 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Tnfrsf1aP25118 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC16.79■□□□□ 0.28
Tnfrsf1aP25118 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tnfrsf1aP25118 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tnfrsf1aP25118 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tnfrsf1aP25118 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Tnfrsf1aP25118 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Tnfrsf1aP25118 Gm42501-201ENSMUST00000200220 1026 ntBASIC16.79■□□□□ 0.28
Tnfrsf1aP25118 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Tnfrsf1aP25118 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tnfrsf1aP25118 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Tnfrsf1aP25118 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tnfrsf1aP25118 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tnfrsf1aP25118 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tnfrsf1aP25118 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tnfrsf1aP25118 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tnfrsf1aP25118 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Tnfrsf1aP25118 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Tnfrsf1aP25118 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tnfrsf1aP25118 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tnfrsf1aP25118 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Tnfrsf1aP25118 AC152827.1-201ENSMUST00000221143 2189 ntBASIC16.78■□□□□ 0.28
Tnfrsf1aP25118 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Tnfrsf1aP25118 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tnfrsf1aP25118 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Tnfrsf1aP25118 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Tnfrsf1aP25118 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tnfrsf1aP25118 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Tnfrsf1aP25118 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tnfrsf1aP25118 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC16.77■□□□□ 0.28
Tnfrsf1aP25118 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC16.77■□□□□ 0.28
Tnfrsf1aP25118 Gm5522-201ENSMUST00000189483 1242 ntBASIC16.77■□□□□ 0.28
Tnfrsf1aP25118 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tnfrsf1aP25118 Gm5812-201ENSMUST00000061073 957 ntBASIC16.77■□□□□ 0.28
Tnfrsf1aP25118 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tnfrsf1aP25118 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC16.77■□□□□ 0.27
Tnfrsf1aP25118 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tnfrsf1aP25118 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Tnfrsf1aP25118 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tnfrsf1aP25118 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tnfrsf1aP25118 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC16.76■□□□□ 0.27
Tnfrsf1aP25118 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Tnfrsf1aP25118 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Tnfrsf1aP25118 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Tnfrsf1aP25118 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tnfrsf1aP25118 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tnfrsf1aP25118 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tnfrsf1aP25118 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tnfrsf1aP25118 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Tnfrsf1aP25118 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tnfrsf1aP25118 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tnfrsf1aP25118 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tnfrsf1aP25118 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tnfrsf1aP25118 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tnfrsf1aP25118 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tnfrsf1aP25118 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Tnfrsf1aP25118 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC16.75■□□□□ 0.27
Tnfrsf1aP25118 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tnfrsf1aP25118 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Tnfrsf1aP25118 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tnfrsf1aP25118 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tnfrsf1aP25118 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tnfrsf1aP25118 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Tnfrsf1aP25118 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.74■□□□□ 0.27
Tnfrsf1aP25118 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tnfrsf1aP25118 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tnfrsf1aP25118 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tnfrsf1aP25118 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC16.74■□□□□ 0.27
Tnfrsf1aP25118 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC16.74■□□□□ 0.27
Tnfrsf1aP25118 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Tnfrsf1aP25118 Gm5131-201ENSMUST00000212776 1238 ntBASIC16.74■□□□□ 0.27
Tnfrsf1aP25118 Gm7143-201ENSMUST00000222811 859 ntBASIC16.74■□□□□ 0.27
Tnfrsf1aP25118 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Tnfrsf1aP25118 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Tnfrsf1aP25118 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tnfrsf1aP25118 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tnfrsf1aP25118 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tnfrsf1aP25118 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Tnfrsf1aP25118 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Tnfrsf1aP25118 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Tnfrsf1aP25118 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Tnfrsf1aP25118 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tnfrsf1aP25118 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tnfrsf1aP25118 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Tnfrsf1aP25118 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tnfrsf1aP25118 Gm15546-201ENSMUST00000122095 826 ntBASIC16.73■□□□□ 0.27
Tnfrsf1aP25118 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC16.73■□□□□ 0.27
Tnfrsf1aP25118 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tnfrsf1aP25118 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Tnfrsf1aP25118 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tnfrsf1aP25118 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tnfrsf1aP25118 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 118 ms