Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ttc3O88196 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ttc3O88196 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ttc3O88196 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC21.35■■□□□ 1.01
Ttc3O88196 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ttc3O88196 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ttc3O88196 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ttc3O88196 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ttc3O88196 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ttc3O88196 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC21.35■■□□□ 1.01
Ttc3O88196 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ttc3O88196 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.35■■□□□ 1.01
Ttc3O88196 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ttc3O88196 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ttc3O88196 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Ttc3O88196 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Ttc3O88196 AC164629.5-201ENSMUST00000220387 632 ntBASIC21.34■■□□□ 1.01
Ttc3O88196 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ttc3O88196 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ttc3O88196 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Ttc3O88196 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Ttc3O88196 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Ttc3O88196 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC21.32■■□□□ 1
Ttc3O88196 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Ttc3O88196 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ttc3O88196 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ttc3O88196 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
Ttc3O88196 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC21.32■■□□□ 1
Ttc3O88196 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Ttc3O88196 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ttc3O88196 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ttc3O88196 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Ttc3O88196 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ttc3O88196 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Ttc3O88196 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC21.31■■□□□ 1
Ttc3O88196 Gm43060-201ENSMUST00000200621 289 ntBASIC21.31■■□□□ 1
Ttc3O88196 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ttc3O88196 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ttc3O88196 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ttc3O88196 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ttc3O88196 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Ttc3O88196 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Ttc3O88196 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ttc3O88196 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.3■■□□□ 1
Ttc3O88196 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ttc3O88196 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ttc3O88196 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC21.29■■□□□ 1
Ttc3O88196 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ttc3O88196 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Ttc3O88196 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Ttc3O88196 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ttc3O88196 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC21.29■■□□□ 1
Ttc3O88196 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC21.29■■□□□ 1
Ttc3O88196 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ttc3O88196 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC21.29■■□□□ 1
Ttc3O88196 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Ttc3O88196 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Ttc3O88196 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC21.29■■□□□ 1
Ttc3O88196 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ttc3O88196 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
Ttc3O88196 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ttc3O88196 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ttc3O88196 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Ttc3O88196 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ttc3O88196 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ttc3O88196 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ttc3O88196 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ttc3O88196 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
Ttc3O88196 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC21.27■■□□□ 1
Ttc3O88196 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ttc3O88196 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ttc3O88196 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ttc3O88196 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Ttc3O88196 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.27■■□□□ 1
Ttc3O88196 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ttc3O88196 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.27■□□□□ 0.99
Ttc3O88196 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Ttc3O88196 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC21.27■□□□□ 0.99
Ttc3O88196 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC21.26■□□□□ 0.99
Ttc3O88196 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
Ttc3O88196 Gm5297-201ENSMUST00000198555 1171 ntBASIC21.26■□□□□ 0.99
Ttc3O88196 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ttc3O88196 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ttc3O88196 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ttc3O88196 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ttc3O88196 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ttc3O88196 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ttc3O88196 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ttc3O88196 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ttc3O88196 AC099934.2-201ENSMUST00000196389 70 ntBASIC21.25■□□□□ 0.99
Ttc3O88196 AC156953.1-201ENSMUST00000196953 70 ntBASIC21.25■□□□□ 0.99
Ttc3O88196 AC157822.2-201ENSMUST00000200291 70 ntBASIC21.25■□□□□ 0.99
Ttc3O88196 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ttc3O88196 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ttc3O88196 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ttc3O88196 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ttc3O88196 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.25■□□□□ 0.99
Ttc3O88196 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Ttc3O88196 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ttc3O88196 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 156.6 ms