Protein–RNA interactions for Protein: O70404

Vamp8, Vesicle-associated membrane protein 8, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp8O70404 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vamp8O70404 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vamp8O70404 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vamp8O70404 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vamp8O70404 Gm9954-202ENSMUST00000198686 4725 ntBASIC14.19□□□□□ -0.14
Vamp8O70404 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vamp8O70404 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vamp8O70404 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vamp8O70404 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vamp8O70404 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vamp8O70404 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vamp8O70404 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC14.19□□□□□ -0.14
Vamp8O70404 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
Vamp8O70404 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Vamp8O70404 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vamp8O70404 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vamp8O70404 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC14.19□□□□□ -0.14
Vamp8O70404 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vamp8O70404 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vamp8O70404 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vamp8O70404 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Vamp8O70404 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vamp8O70404 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vamp8O70404 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Vamp8O70404 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vamp8O70404 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Vamp8O70404 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Vamp8O70404 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vamp8O70404 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vamp8O70404 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vamp8O70404 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vamp8O70404 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vamp8O70404 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vamp8O70404 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Vamp8O70404 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vamp8O70404 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vamp8O70404 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Vamp8O70404 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vamp8O70404 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vamp8O70404 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vamp8O70404 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vamp8O70404 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vamp8O70404 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vamp8O70404 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vamp8O70404 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vamp8O70404 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vamp8O70404 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vamp8O70404 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
Vamp8O70404 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC14.16□□□□□ -0.14
Vamp8O70404 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vamp8O70404 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vamp8O70404 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vamp8O70404 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vamp8O70404 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vamp8O70404 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vamp8O70404 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vamp8O70404 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vamp8O70404 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC14.15□□□□□ -0.14
Vamp8O70404 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vamp8O70404 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vamp8O70404 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Vamp8O70404 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC14.15□□□□□ -0.14
Vamp8O70404 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vamp8O70404 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Vamp8O70404 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vamp8O70404 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Vamp8O70404 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vamp8O70404 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Vamp8O70404 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vamp8O70404 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Vamp8O70404 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC14.15□□□□□ -0.14
Vamp8O70404 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Vamp8O70404 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vamp8O70404 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vamp8O70404 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vamp8O70404 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Vamp8O70404 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vamp8O70404 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vamp8O70404 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC14.14□□□□□ -0.15
Vamp8O70404 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC14.14□□□□□ -0.15
Vamp8O70404 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vamp8O70404 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vamp8O70404 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vamp8O70404 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vamp8O70404 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vamp8O70404 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vamp8O70404 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vamp8O70404 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Vamp8O70404 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vamp8O70404 Gm37035-201ENSMUST00000194809 2148 ntBASIC14.14□□□□□ -0.15
Vamp8O70404 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vamp8O70404 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vamp8O70404 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Vamp8O70404 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC14.13□□□□□ -0.15
Vamp8O70404 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vamp8O70404 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vamp8O70404 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vamp8O70404 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vamp8O70404 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC14.13□□□□□ -0.15
Vamp8O70404 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms