Protein–RNA interactions for Protein: O70401

Tspan6, Tetraspanin-6, mousemouse

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tspan6O70401 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tspan6O70401 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tspan6O70401 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tspan6O70401 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Tspan6O70401 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.7■□□□□ 0.74
Tspan6O70401 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tspan6O70401 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Tspan6O70401 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tspan6O70401 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tspan6O70401 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Tspan6O70401 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tspan6O70401 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tspan6O70401 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Tspan6O70401 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Tspan6O70401 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Tspan6O70401 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Tspan6O70401 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Tspan6O70401 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tspan6O70401 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.68■□□□□ 0.74
Tspan6O70401 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.68■□□□□ 0.74
Tspan6O70401 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Tspan6O70401 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
Tspan6O70401 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tspan6O70401 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
Tspan6O70401 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tspan6O70401 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tspan6O70401 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.67■□□□□ 0.74
Tspan6O70401 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tspan6O70401 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tspan6O70401 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.67■□□□□ 0.74
Tspan6O70401 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tspan6O70401 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.67■□□□□ 0.74
Tspan6O70401 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tspan6O70401 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tspan6O70401 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.66■□□□□ 0.74
Tspan6O70401 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tspan6O70401 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.66■□□□□ 0.74
Tspan6O70401 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.66■□□□□ 0.74
Tspan6O70401 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tspan6O70401 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tspan6O70401 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Tspan6O70401 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Tspan6O70401 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tspan6O70401 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tspan6O70401 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Tspan6O70401 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tspan6O70401 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Tspan6O70401 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tspan6O70401 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tspan6O70401 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Tspan6O70401 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tspan6O70401 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Tspan6O70401 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.64■□□□□ 0.74
Tspan6O70401 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.64■□□□□ 0.73
Tspan6O70401 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tspan6O70401 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tspan6O70401 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tspan6O70401 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.63■□□□□ 0.73
Tspan6O70401 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tspan6O70401 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tspan6O70401 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Tspan6O70401 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tspan6O70401 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.63■□□□□ 0.73
Tspan6O70401 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Tspan6O70401 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Tspan6O70401 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tspan6O70401 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.63■□□□□ 0.73
Tspan6O70401 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.62■□□□□ 0.73
Tspan6O70401 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Tspan6O70401 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Tspan6O70401 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tspan6O70401 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tspan6O70401 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tspan6O70401 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tspan6O70401 Gm11421-201ENSMUST00000122124 294 ntBASIC19.62■□□□□ 0.73
Tspan6O70401 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.62■□□□□ 0.73
Tspan6O70401 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.62■□□□□ 0.73
Tspan6O70401 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.62■□□□□ 0.73
Tspan6O70401 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.62■□□□□ 0.73
Tspan6O70401 AC164629.5-201ENSMUST00000220387 632 ntBASIC19.62■□□□□ 0.73
Tspan6O70401 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tspan6O70401 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tspan6O70401 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Tspan6O70401 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tspan6O70401 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tspan6O70401 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.61■□□□□ 0.73
Tspan6O70401 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tspan6O70401 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Tspan6O70401 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.61■□□□□ 0.73
Tspan6O70401 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Tspan6O70401 Gm5297-201ENSMUST00000198555 1171 ntBASIC19.61■□□□□ 0.73
Tspan6O70401 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.61■□□□□ 0.73
Tspan6O70401 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.61■□□□□ 0.73
Tspan6O70401 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Tspan6O70401 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tspan6O70401 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tspan6O70401 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tspan6O70401 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Tspan6O70401 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tspan6O70401 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms