Protein–RNA interactions for Protein: O35451

Atf6b, Cyclic AMP-dependent transcription factor ATF-6 beta, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6bO35451 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Atf6bO35451 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atf6bO35451 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atf6bO35451 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atf6bO35451 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atf6bO35451 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Atf6bO35451 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atf6bO35451 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC17.35■□□□□ 0.37
Atf6bO35451 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC17.35■□□□□ 0.37
Atf6bO35451 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atf6bO35451 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Atf6bO35451 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atf6bO35451 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atf6bO35451 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atf6bO35451 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atf6bO35451 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atf6bO35451 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atf6bO35451 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atf6bO35451 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Atf6bO35451 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atf6bO35451 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atf6bO35451 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
Atf6bO35451 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC17.34■□□□□ 0.37
Atf6bO35451 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC17.34■□□□□ 0.37
Atf6bO35451 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atf6bO35451 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atf6bO35451 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atf6bO35451 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Atf6bO35451 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atf6bO35451 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Atf6bO35451 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Atf6bO35451 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Atf6bO35451 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Atf6bO35451 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Atf6bO35451 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Atf6bO35451 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC17.33■□□□□ 0.37
Atf6bO35451 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC17.33■□□□□ 0.36
Atf6bO35451 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Atf6bO35451 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC17.33■□□□□ 0.36
Atf6bO35451 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Atf6bO35451 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC17.33■□□□□ 0.36
Atf6bO35451 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC17.33■□□□□ 0.36
Atf6bO35451 Golgb1-201ENSMUST00000023534 498 ntBASIC17.33■□□□□ 0.36
Atf6bO35451 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Atf6bO35451 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Atf6bO35451 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Atf6bO35451 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC17.33■□□□□ 0.36
Atf6bO35451 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Atf6bO35451 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atf6bO35451 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atf6bO35451 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.32■□□□□ 0.36
Atf6bO35451 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC17.32■□□□□ 0.36
Atf6bO35451 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Atf6bO35451 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atf6bO35451 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atf6bO35451 Gm13241-201ENSMUST00000094493 780 ntBASIC17.32■□□□□ 0.36
Atf6bO35451 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atf6bO35451 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atf6bO35451 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atf6bO35451 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atf6bO35451 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atf6bO35451 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Atf6bO35451 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atf6bO35451 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Atf6bO35451 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Atf6bO35451 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
Atf6bO35451 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atf6bO35451 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atf6bO35451 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atf6bO35451 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Atf6bO35451 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atf6bO35451 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Atf6bO35451 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atf6bO35451 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC17.31■□□□□ 0.36
Atf6bO35451 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atf6bO35451 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atf6bO35451 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Atf6bO35451 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atf6bO35451 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atf6bO35451 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
Atf6bO35451 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atf6bO35451 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC17.3■□□□□ 0.36
Atf6bO35451 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atf6bO35451 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atf6bO35451 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atf6bO35451 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atf6bO35451 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atf6bO35451 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atf6bO35451 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Atf6bO35451 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atf6bO35451 Gm10657-201ENSMUST00000193528 1031 ntBASIC17.29■□□□□ 0.36
Atf6bO35451 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atf6bO35451 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atf6bO35451 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Atf6bO35451 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atf6bO35451 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atf6bO35451 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atf6bO35451 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atf6bO35451 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atf6bO35451 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms