Protein–RNA interactions for Protein: K7N6K7

Sirpb1c, Signal-regulatory protein beta 1C, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1cK7N6K7 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Sirpb1cK7N6K7 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Sirpb1cK7N6K7 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC17.62■□□□□ 0.41
Sirpb1cK7N6K7 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sirpb1cK7N6K7 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Sirpb1cK7N6K7 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sirpb1cK7N6K7 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sirpb1cK7N6K7 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Sirpb1cK7N6K7 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sirpb1cK7N6K7 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sirpb1cK7N6K7 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sirpb1cK7N6K7 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sirpb1cK7N6K7 Gm22238-201ENSMUST00000175222 88 ntBASIC17.61■□□□□ 0.41
Sirpb1cK7N6K7 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sirpb1cK7N6K7 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC17.61■□□□□ 0.41
Sirpb1cK7N6K7 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sirpb1cK7N6K7 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sirpb1cK7N6K7 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sirpb1cK7N6K7 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sirpb1cK7N6K7 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sirpb1cK7N6K7 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Sirpb1cK7N6K7 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Sirpb1cK7N6K7 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Sirpb1cK7N6K7 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Sirpb1cK7N6K7 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sirpb1cK7N6K7 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Sirpb1cK7N6K7 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sirpb1cK7N6K7 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Sirpb1cK7N6K7 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Sirpb1cK7N6K7 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC17.6■□□□□ 0.41
Sirpb1cK7N6K7 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sirpb1cK7N6K7 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sirpb1cK7N6K7 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sirpb1cK7N6K7 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sirpb1cK7N6K7 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Sirpb1cK7N6K7 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sirpb1cK7N6K7 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.6■□□□□ 0.41
Sirpb1cK7N6K7 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sirpb1cK7N6K7 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sirpb1cK7N6K7 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC17.59■□□□□ 0.41
Sirpb1cK7N6K7 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sirpb1cK7N6K7 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sirpb1cK7N6K7 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC17.59■□□□□ 0.41
Sirpb1cK7N6K7 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Sirpb1cK7N6K7 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sirpb1cK7N6K7 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sirpb1cK7N6K7 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Sirpb1cK7N6K7 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sirpb1cK7N6K7 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sirpb1cK7N6K7 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sirpb1cK7N6K7 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sirpb1cK7N6K7 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sirpb1cK7N6K7 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sirpb1cK7N6K7 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sirpb1cK7N6K7 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sirpb1cK7N6K7 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Sirpb1cK7N6K7 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sirpb1cK7N6K7 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sirpb1cK7N6K7 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sirpb1cK7N6K7 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sirpb1cK7N6K7 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sirpb1cK7N6K7 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sirpb1cK7N6K7 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sirpb1cK7N6K7 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sirpb1cK7N6K7 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.57■□□□□ 0.4
Sirpb1cK7N6K7 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sirpb1cK7N6K7 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Sirpb1cK7N6K7 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Sirpb1cK7N6K7 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC17.57■□□□□ 0.4
Sirpb1cK7N6K7 Gm10399-202ENSMUST00000202768 748 ntBASIC17.57■□□□□ 0.4
Sirpb1cK7N6K7 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sirpb1cK7N6K7 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.57■□□□□ 0.4
Sirpb1cK7N6K7 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Sirpb1cK7N6K7 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sirpb1cK7N6K7 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sirpb1cK7N6K7 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Sirpb1cK7N6K7 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sirpb1cK7N6K7 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Sirpb1cK7N6K7 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Sirpb1cK7N6K7 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Sirpb1cK7N6K7 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sirpb1cK7N6K7 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sirpb1cK7N6K7 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sirpb1cK7N6K7 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.56■□□□□ 0.4
Sirpb1cK7N6K7 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
Sirpb1cK7N6K7 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sirpb1cK7N6K7 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sirpb1cK7N6K7 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sirpb1cK7N6K7 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Sirpb1cK7N6K7 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Sirpb1cK7N6K7 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Sirpb1cK7N6K7 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sirpb1cK7N6K7 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sirpb1cK7N6K7 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sirpb1cK7N6K7 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sirpb1cK7N6K7 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sirpb1cK7N6K7 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sirpb1cK7N6K7 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sirpb1cK7N6K7 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sirpb1cK7N6K7 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms