Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC11.69□□□□□ -0.54
Herc1E9PZP8 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC11.69□□□□□ -0.54
Herc1E9PZP8 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Herc1E9PZP8 Gm11421-201ENSMUST00000122124 294 ntBASIC11.68□□□□□ -0.54
Herc1E9PZP8 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC11.68□□□□□ -0.54
Herc1E9PZP8 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Herc1E9PZP8 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Herc1E9PZP8 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Herc1E9PZP8 Gm6365-201ENSMUST00000054711 744 ntBASIC11.68□□□□□ -0.54
Herc1E9PZP8 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Herc1E9PZP8 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC11.68□□□□□ -0.54
Herc1E9PZP8 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Herc1E9PZP8 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Herc1E9PZP8 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Herc1E9PZP8 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
Herc1E9PZP8 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Herc1E9PZP8 Gm6211-202ENSMUST00000167849 925 ntBASIC11.67□□□□□ -0.54
Herc1E9PZP8 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Herc1E9PZP8 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC11.67□□□□□ -0.54
Herc1E9PZP8 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC11.67□□□□□ -0.54
Herc1E9PZP8 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC11.67□□□□□ -0.54
Herc1E9PZP8 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC11.67□□□□□ -0.54
Herc1E9PZP8 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC11.66□□□□□ -0.54
Herc1E9PZP8 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
Herc1E9PZP8 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Herc1E9PZP8 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC11.66□□□□□ -0.54
Herc1E9PZP8 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC11.66□□□□□ -0.54
Herc1E9PZP8 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC11.66□□□□□ -0.54
Herc1E9PZP8 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
Herc1E9PZP8 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Herc1E9PZP8 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Herc1E9PZP8 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Herc1E9PZP8 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Herc1E9PZP8 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC11.66□□□□□ -0.54
Herc1E9PZP8 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Herc1E9PZP8 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC11.65□□□□□ -0.54
Herc1E9PZP8 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC11.65□□□□□ -0.54
Herc1E9PZP8 Gm5643-201ENSMUST00000117081 966 ntBASIC11.65□□□□□ -0.54
Herc1E9PZP8 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Herc1E9PZP8 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Herc1E9PZP8 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Herc1E9PZP8 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
Herc1E9PZP8 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Herc1E9PZP8 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC11.65□□□□□ -0.54
Herc1E9PZP8 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Herc1E9PZP8 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Herc1E9PZP8 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Herc1E9PZP8 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Herc1E9PZP8 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC11.65□□□□□ -0.54
Herc1E9PZP8 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC11.65□□□□□ -0.54
Herc1E9PZP8 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Herc1E9PZP8 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Herc1E9PZP8 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Herc1E9PZP8 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Herc1E9PZP8 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Herc1E9PZP8 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Herc1E9PZP8 Gm17971-201ENSMUST00000190239 806 ntBASIC11.64□□□□□ -0.55
Herc1E9PZP8 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Herc1E9PZP8 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Herc1E9PZP8 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC11.64□□□□□ -0.55
Herc1E9PZP8 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC11.64□□□□□ -0.55
Herc1E9PZP8 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Herc1E9PZP8 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Herc1E9PZP8 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Herc1E9PZP8 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Herc1E9PZP8 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC11.64□□□□□ -0.55
Herc1E9PZP8 Gm26524-201ENSMUST00000192339 390 ntBASIC11.64□□□□□ -0.55
Herc1E9PZP8 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Herc1E9PZP8 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Herc1E9PZP8 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Herc1E9PZP8 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC11.64□□□□□ -0.55
Herc1E9PZP8 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC11.64□□□□□ -0.55
Herc1E9PZP8 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Herc1E9PZP8 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Herc1E9PZP8 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Herc1E9PZP8 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Herc1E9PZP8 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Herc1E9PZP8 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC11.63□□□□□ -0.55
Herc1E9PZP8 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Herc1E9PZP8 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Herc1E9PZP8 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Herc1E9PZP8 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Herc1E9PZP8 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Herc1E9PZP8 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Herc1E9PZP8 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC11.63□□□□□ -0.55
Herc1E9PZP8 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC11.63□□□□□ -0.55
Herc1E9PZP8 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Herc1E9PZP8 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Herc1E9PZP8 Gm7290-201ENSMUST00000104990 617 ntBASIC11.62□□□□□ -0.55
Herc1E9PZP8 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Herc1E9PZP8 Gm12918-201ENSMUST00000120234 636 ntBASIC11.62□□□□□ -0.55
Herc1E9PZP8 Gm15710-201ENSMUST00000121821 636 ntBASIC11.62□□□□□ -0.55
Herc1E9PZP8 Gm5075-201ENSMUST00000196916 622 ntBASIC11.62□□□□□ -0.55
Herc1E9PZP8 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Herc1E9PZP8 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC11.62□□□□□ -0.55
Herc1E9PZP8 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC11.62□□□□□ -0.55
Herc1E9PZP8 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Herc1E9PZP8 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Herc1E9PZP8 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Herc1E9PZP8 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms