Protein–RNA interactions for Protein: E9PUB3

Gm5878, Predicted gene 5878, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5878E9PUB3 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm5878E9PUB3 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm5878E9PUB3 Gm10616-201ENSMUST00000205285 2127 ntBASIC15.13■□□□□ 0.01
Gm5878E9PUB3 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC15.12■□□□□ 0.01
Gm5878E9PUB3 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm5878E9PUB3 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm5878E9PUB3 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Gm5878E9PUB3 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Gm5878E9PUB3 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC15.12■□□□□ 0.01
Gm5878E9PUB3 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC15.12■□□□□ 0.01
Gm5878E9PUB3 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm5878E9PUB3 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC15.12■□□□□ 0.01
Gm5878E9PUB3 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
Gm5878E9PUB3 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm5878E9PUB3 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm5878E9PUB3 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Gm5878E9PUB3 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm5878E9PUB3 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Gm5878E9PUB3 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Gm5878E9PUB3 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm5878E9PUB3 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
Gm5878E9PUB3 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm5878E9PUB3 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Gm5878E9PUB3 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Gm5878E9PUB3 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm5878E9PUB3 Gm18755-201ENSMUST00000218030 1099 ntBASIC15.11■□□□□ 0.01
Gm5878E9PUB3 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Gm5878E9PUB3 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Gm5878E9PUB3 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm5878E9PUB3 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
Gm5878E9PUB3 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm5878E9PUB3 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm5878E9PUB3 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm5878E9PUB3 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Gm5878E9PUB3 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm5878E9PUB3 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC15.1■□□□□ 0.01
Gm5878E9PUB3 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Gm5878E9PUB3 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC15.1■□□□□ 0.01
Gm5878E9PUB3 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm5878E9PUB3 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm5878E9PUB3 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm5878E9PUB3 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm5878E9PUB3 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
Gm5878E9PUB3 Gm43909-201ENSMUST00000203443 1876 ntBASIC15.1■□□□□ 0.01
Gm5878E9PUB3 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Gm5878E9PUB3 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Gm5878E9PUB3 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC15.09■□□□□ 0.01
Gm5878E9PUB3 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm5878E9PUB3 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm5878E9PUB3 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm5878E9PUB3 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Gm5878E9PUB3 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Gm5878E9PUB3 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm5878E9PUB3 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Gm5878E9PUB3 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Gm5878E9PUB3 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Gm5878E9PUB3 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC15.09■□□□□ 0.01
Gm5878E9PUB3 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm5878E9PUB3 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm5878E9PUB3 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm5878E9PUB3 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm5878E9PUB3 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm5878E9PUB3 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Gm5878E9PUB3 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Gm5878E9PUB3 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm5878E9PUB3 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Gm5878E9PUB3 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Gm5878E9PUB3 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Gm5878E9PUB3 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Gm5878E9PUB3 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Gm5878E9PUB3 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Gm5878E9PUB3 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC15.08■□□□□ 0
Gm5878E9PUB3 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Gm5878E9PUB3 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Gm5878E9PUB3 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC15.08■□□□□ 0
Gm5878E9PUB3 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Gm5878E9PUB3 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Gm5878E9PUB3 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC15.07■□□□□ 0
Gm5878E9PUB3 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Gm5878E9PUB3 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC15.07■□□□□ 0
Gm5878E9PUB3 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC15.07■□□□□ 0
Gm5878E9PUB3 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC15.07■□□□□ 0
Gm5878E9PUB3 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Gm5878E9PUB3 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Gm5878E9PUB3 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Gm5878E9PUB3 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Gm5878E9PUB3 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC15.07■□□□□ 0
Gm5878E9PUB3 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Gm5878E9PUB3 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Gm5878E9PUB3 Mir6236-201ENSMUST00000184437 123 ntBASIC15.07■□□□□ 0
Gm5878E9PUB3 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Gm5878E9PUB3 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Gm5878E9PUB3 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC15.07■□□□□ 0
Gm5878E9PUB3 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC15.07■□□□□ 0
Gm5878E9PUB3 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC15.07■□□□□ 0
Gm5878E9PUB3 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Gm5878E9PUB3 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC15.06■□□□□ 0
Gm5878E9PUB3 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Gm5878E9PUB3 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Gm5878E9PUB3 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms