Protein–RNA interactions for Protein: A0A140T8R2

Vma21-ps, Vacuolar ATPase assembly integral membrane protein VMA21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21-psA0A140T8R2 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Vma21-psA0A140T8R2 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Vma21-psA0A140T8R2 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC16.05■□□□□ 0.16
Vma21-psA0A140T8R2 Gm13238-201ENSMUST00000117655 780 ntBASIC16.05■□□□□ 0.16
Vma21-psA0A140T8R2 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Vma21-psA0A140T8R2 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Vma21-psA0A140T8R2 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Vma21-psA0A140T8R2 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Vma21-psA0A140T8R2 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Vma21-psA0A140T8R2 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Vma21-psA0A140T8R2 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vma21-psA0A140T8R2 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vma21-psA0A140T8R2 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vma21-psA0A140T8R2 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Vma21-psA0A140T8R2 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vma21-psA0A140T8R2 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC16.04■□□□□ 0.16
Vma21-psA0A140T8R2 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vma21-psA0A140T8R2 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Vma21-psA0A140T8R2 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vma21-psA0A140T8R2 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vma21-psA0A140T8R2 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vma21-psA0A140T8R2 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vma21-psA0A140T8R2 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vma21-psA0A140T8R2 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vma21-psA0A140T8R2 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Vma21-psA0A140T8R2 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC16.03■□□□□ 0.16
Vma21-psA0A140T8R2 Gm5131-201ENSMUST00000212776 1238 ntBASIC16.03■□□□□ 0.16
Vma21-psA0A140T8R2 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vma21-psA0A140T8R2 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vma21-psA0A140T8R2 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vma21-psA0A140T8R2 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vma21-psA0A140T8R2 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vma21-psA0A140T8R2 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vma21-psA0A140T8R2 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Vma21-psA0A140T8R2 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC16.02■□□□□ 0.16
Vma21-psA0A140T8R2 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Vma21-psA0A140T8R2 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Vma21-psA0A140T8R2 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Vma21-psA0A140T8R2 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Vma21-psA0A140T8R2 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Vma21-psA0A140T8R2 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Vma21-psA0A140T8R2 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Vma21-psA0A140T8R2 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.15
Vma21-psA0A140T8R2 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Vma21-psA0A140T8R2 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Vma21-psA0A140T8R2 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Vma21-psA0A140T8R2 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Vma21-psA0A140T8R2 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vma21-psA0A140T8R2 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vma21-psA0A140T8R2 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vma21-psA0A140T8R2 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vma21-psA0A140T8R2 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vma21-psA0A140T8R2 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vma21-psA0A140T8R2 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vma21-psA0A140T8R2 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vma21-psA0A140T8R2 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vma21-psA0A140T8R2 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vma21-psA0A140T8R2 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC16.01■□□□□ 0.15
Vma21-psA0A140T8R2 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vma21-psA0A140T8R2 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Vma21-psA0A140T8R2 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC16.01■□□□□ 0.15
Vma21-psA0A140T8R2 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vma21-psA0A140T8R2 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Vma21-psA0A140T8R2 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vma21-psA0A140T8R2 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16■□□□□ 0.15
Vma21-psA0A140T8R2 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vma21-psA0A140T8R2 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC16■□□□□ 0.15
Vma21-psA0A140T8R2 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Vma21-psA0A140T8R2 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vma21-psA0A140T8R2 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC16■□□□□ 0.15
Vma21-psA0A140T8R2 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vma21-psA0A140T8R2 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vma21-psA0A140T8R2 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vma21-psA0A140T8R2 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vma21-psA0A140T8R2 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vma21-psA0A140T8R2 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vma21-psA0A140T8R2 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vma21-psA0A140T8R2 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vma21-psA0A140T8R2 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Vma21-psA0A140T8R2 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC15.99■□□□□ 0.15
Vma21-psA0A140T8R2 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC15.99■□□□□ 0.15
Vma21-psA0A140T8R2 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC15.99■□□□□ 0.15
Vma21-psA0A140T8R2 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC15.99■□□□□ 0.15
Vma21-psA0A140T8R2 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Vma21-psA0A140T8R2 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vma21-psA0A140T8R2 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Vma21-psA0A140T8R2 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vma21-psA0A140T8R2 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Vma21-psA0A140T8R2 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vma21-psA0A140T8R2 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vma21-psA0A140T8R2 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vma21-psA0A140T8R2 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Vma21-psA0A140T8R2 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC15.98■□□□□ 0.15
Vma21-psA0A140T8R2 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vma21-psA0A140T8R2 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vma21-psA0A140T8R2 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vma21-psA0A140T8R2 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Vma21-psA0A140T8R2 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Vma21-psA0A140T8R2 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vma21-psA0A140T8R2 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms