Protein–RNA interactions for Protein: A0A0G2JGQ7

Trav15d-2-dv6d-2, T cell receptor alpha variable 15D-2-DV6D-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-2-dv6d-2A0A0G2JGQ7 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav15d-2-dv6d-2A0A0G2JGQ7 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trav15d-2-dv6d-2A0A0G2JGQ7 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav15d-2-dv6d-2A0A0G2JGQ7 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav15d-2-dv6d-2A0A0G2JGQ7 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Trav15d-2-dv6d-2A0A0G2JGQ7 AC166356.1-201ENSMUST00000228236 1426 ntBASIC17.67■□□□□ 0.42
Trav15d-2-dv6d-2A0A0G2JGQ7 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav15d-2-dv6d-2A0A0G2JGQ7 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav15d-2-dv6d-2A0A0G2JGQ7 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC17.67■□□□□ 0.42
Trav15d-2-dv6d-2A0A0G2JGQ7 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav15d-2-dv6d-2A0A0G2JGQ7 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav15d-2-dv6d-2A0A0G2JGQ7 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav15d-2-dv6d-2A0A0G2JGQ7 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav15d-2-dv6d-2A0A0G2JGQ7 Golph3-202ENSMUST00000226517 2359 ntBASIC17.66■□□□□ 0.42
Trav15d-2-dv6d-2A0A0G2JGQ7 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav15d-2-dv6d-2A0A0G2JGQ7 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Trav15d-2-dv6d-2A0A0G2JGQ7 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav15d-2-dv6d-2A0A0G2JGQ7 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Trav15d-2-dv6d-2A0A0G2JGQ7 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Trav15d-2-dv6d-2A0A0G2JGQ7 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav15d-2-dv6d-2A0A0G2JGQ7 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trav15d-2-dv6d-2A0A0G2JGQ7 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav15d-2-dv6d-2A0A0G2JGQ7 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav15d-2-dv6d-2A0A0G2JGQ7 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav15d-2-dv6d-2A0A0G2JGQ7 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav15d-2-dv6d-2A0A0G2JGQ7 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav15d-2-dv6d-2A0A0G2JGQ7 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trav15d-2-dv6d-2A0A0G2JGQ7 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Trav15d-2-dv6d-2A0A0G2JGQ7 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC17.65■□□□□ 0.42
Trav15d-2-dv6d-2A0A0G2JGQ7 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC17.65■□□□□ 0.42
Trav15d-2-dv6d-2A0A0G2JGQ7 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Trav15d-2-dv6d-2A0A0G2JGQ7 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav15d-2-dv6d-2A0A0G2JGQ7 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav15d-2-dv6d-2A0A0G2JGQ7 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav15d-2-dv6d-2A0A0G2JGQ7 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav15d-2-dv6d-2A0A0G2JGQ7 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
Trav15d-2-dv6d-2A0A0G2JGQ7 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Trav15d-2-dv6d-2A0A0G2JGQ7 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav15d-2-dv6d-2A0A0G2JGQ7 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav15d-2-dv6d-2A0A0G2JGQ7 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav15d-2-dv6d-2A0A0G2JGQ7 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav15d-2-dv6d-2A0A0G2JGQ7 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trav15d-2-dv6d-2A0A0G2JGQ7 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trav15d-2-dv6d-2A0A0G2JGQ7 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Trav15d-2-dv6d-2A0A0G2JGQ7 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav15d-2-dv6d-2A0A0G2JGQ7 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trav15d-2-dv6d-2A0A0G2JGQ7 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav15d-2-dv6d-2A0A0G2JGQ7 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
Trav15d-2-dv6d-2A0A0G2JGQ7 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC17.63■□□□□ 0.41
Trav15d-2-dv6d-2A0A0G2JGQ7 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Trav15d-2-dv6d-2A0A0G2JGQ7 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC17.63■□□□□ 0.41
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC17.63■□□□□ 0.41
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm40881-201ENSMUST00000223397 166 ntBASIC17.63■□□□□ 0.41
Trav15d-2-dv6d-2A0A0G2JGQ7 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav15d-2-dv6d-2A0A0G2JGQ7 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav15d-2-dv6d-2A0A0G2JGQ7 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trav15d-2-dv6d-2A0A0G2JGQ7 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trav15d-2-dv6d-2A0A0G2JGQ7 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav15d-2-dv6d-2A0A0G2JGQ7 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav15d-2-dv6d-2A0A0G2JGQ7 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC17.62■□□□□ 0.41
Trav15d-2-dv6d-2A0A0G2JGQ7 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav15d-2-dv6d-2A0A0G2JGQ7 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trav15d-2-dv6d-2A0A0G2JGQ7 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Trav15d-2-dv6d-2A0A0G2JGQ7 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trav15d-2-dv6d-2A0A0G2JGQ7 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav15d-2-dv6d-2A0A0G2JGQ7 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav15d-2-dv6d-2A0A0G2JGQ7 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Trav15d-2-dv6d-2A0A0G2JGQ7 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trav15d-2-dv6d-2A0A0G2JGQ7 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav15d-2-dv6d-2A0A0G2JGQ7 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trav15d-2-dv6d-2A0A0G2JGQ7 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav15d-2-dv6d-2A0A0G2JGQ7 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav15d-2-dv6d-2A0A0G2JGQ7 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav15d-2-dv6d-2A0A0G2JGQ7 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav15d-2-dv6d-2A0A0G2JGQ7 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav15d-2-dv6d-2A0A0G2JGQ7 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trav15d-2-dv6d-2A0A0G2JGQ7 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav15d-2-dv6d-2A0A0G2JGQ7 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Trav15d-2-dv6d-2A0A0G2JGQ7 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav15d-2-dv6d-2A0A0G2JGQ7 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Trav15d-2-dv6d-2A0A0G2JGQ7 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC17.6■□□□□ 0.41
Trav15d-2-dv6d-2A0A0G2JGQ7 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trav15d-2-dv6d-2A0A0G2JGQ7 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC17.6■□□□□ 0.41
Trav15d-2-dv6d-2A0A0G2JGQ7 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trav15d-2-dv6d-2A0A0G2JGQ7 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav15d-2-dv6d-2A0A0G2JGQ7 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.59■□□□□ 0.41
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.59■□□□□ 0.41
Trav15d-2-dv6d-2A0A0G2JGQ7 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.59■□□□□ 0.41
Trav15d-2-dv6d-2A0A0G2JGQ7 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav15d-2-dv6d-2A0A0G2JGQ7 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav15d-2-dv6d-2A0A0G2JGQ7 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms