Protein–RNA interactions for Protein: A0A0B4J1J1

Igkv5-45, Immunoglobulin kappa chain variable 5-45 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-45A0A0B4J1J1 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Igkv5-45A0A0B4J1J1 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Igkv5-45A0A0B4J1J1 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Igkv5-45A0A0B4J1J1 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Igkv5-45A0A0B4J1J1 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Igkv5-45A0A0B4J1J1 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Igkv5-45A0A0B4J1J1 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Igkv5-45A0A0B4J1J1 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.79■□□□□ 0.92
Igkv5-45A0A0B4J1J1 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.79■□□□□ 0.92
Igkv5-45A0A0B4J1J1 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Igkv5-45A0A0B4J1J1 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.79■□□□□ 0.92
Igkv5-45A0A0B4J1J1 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Igkv5-45A0A0B4J1J1 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Igkv5-45A0A0B4J1J1 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Igkv5-45A0A0B4J1J1 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.79■□□□□ 0.92
Igkv5-45A0A0B4J1J1 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Igkv5-45A0A0B4J1J1 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Igkv5-45A0A0B4J1J1 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
Igkv5-45A0A0B4J1J1 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Igkv5-45A0A0B4J1J1 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.78■□□□□ 0.92
Igkv5-45A0A0B4J1J1 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Igkv5-45A0A0B4J1J1 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Igkv5-45A0A0B4J1J1 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
Igkv5-45A0A0B4J1J1 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Igkv5-45A0A0B4J1J1 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Igkv5-45A0A0B4J1J1 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.77■□□□□ 0.91
Igkv5-45A0A0B4J1J1 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Igkv5-45A0A0B4J1J1 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Igkv5-45A0A0B4J1J1 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Igkv5-45A0A0B4J1J1 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Igkv5-45A0A0B4J1J1 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Igkv5-45A0A0B4J1J1 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Igkv5-45A0A0B4J1J1 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.76■□□□□ 0.91
Igkv5-45A0A0B4J1J1 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Igkv5-45A0A0B4J1J1 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Igkv5-45A0A0B4J1J1 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.76■□□□□ 0.91
Igkv5-45A0A0B4J1J1 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Igkv5-45A0A0B4J1J1 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Igkv5-45A0A0B4J1J1 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Igkv5-45A0A0B4J1J1 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Igkv5-45A0A0B4J1J1 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Igkv5-45A0A0B4J1J1 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Igkv5-45A0A0B4J1J1 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Igkv5-45A0A0B4J1J1 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Igkv5-45A0A0B4J1J1 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Igkv5-45A0A0B4J1J1 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Igkv5-45A0A0B4J1J1 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Igkv5-45A0A0B4J1J1 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Igkv5-45A0A0B4J1J1 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Igkv5-45A0A0B4J1J1 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Igkv5-45A0A0B4J1J1 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.75■□□□□ 0.91
Igkv5-45A0A0B4J1J1 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Igkv5-45A0A0B4J1J1 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.75■□□□□ 0.91
Igkv5-45A0A0B4J1J1 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Igkv5-45A0A0B4J1J1 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Igkv5-45A0A0B4J1J1 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Igkv5-45A0A0B4J1J1 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Igkv5-45A0A0B4J1J1 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Igkv5-45A0A0B4J1J1 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Igkv5-45A0A0B4J1J1 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Igkv5-45A0A0B4J1J1 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.73■□□□□ 0.91
Igkv5-45A0A0B4J1J1 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Igkv5-45A0A0B4J1J1 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Igkv5-45A0A0B4J1J1 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Igkv5-45A0A0B4J1J1 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Igkv5-45A0A0B4J1J1 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Igkv5-45A0A0B4J1J1 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Igkv5-45A0A0B4J1J1 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Igkv5-45A0A0B4J1J1 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.72■□□□□ 0.91
Igkv5-45A0A0B4J1J1 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Igkv5-45A0A0B4J1J1 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Igkv5-45A0A0B4J1J1 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Igkv5-45A0A0B4J1J1 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.72■□□□□ 0.91
Igkv5-45A0A0B4J1J1 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Igkv5-45A0A0B4J1J1 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Igkv5-45A0A0B4J1J1 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Igkv5-45A0A0B4J1J1 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Igkv5-45A0A0B4J1J1 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Igkv5-45A0A0B4J1J1 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Igkv5-45A0A0B4J1J1 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Igkv5-45A0A0B4J1J1 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Igkv5-45A0A0B4J1J1 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Igkv5-45A0A0B4J1J1 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Igkv5-45A0A0B4J1J1 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
Igkv5-45A0A0B4J1J1 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Igkv5-45A0A0B4J1J1 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Igkv5-45A0A0B4J1J1 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Igkv5-45A0A0B4J1J1 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.71■□□□□ 0.91
Igkv5-45A0A0B4J1J1 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Igkv5-45A0A0B4J1J1 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Igkv5-45A0A0B4J1J1 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Igkv5-45A0A0B4J1J1 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
Igkv5-45A0A0B4J1J1 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Igkv5-45A0A0B4J1J1 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Igkv5-45A0A0B4J1J1 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.91
Igkv5-45A0A0B4J1J1 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Igkv5-45A0A0B4J1J1 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
Igkv5-45A0A0B4J1J1 Smad6-203ENSMUST00000179458 273 ntBASIC20.7■□□□□ 0.9
Igkv5-45A0A0B4J1J1 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.7■□□□□ 0.9
Igkv5-45A0A0B4J1J1 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms