Protein–RNA interactions for Protein: Q9R1R0

Lhx6, LIM/homeobox protein Lhx6, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx6Q9R1R0 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Lhx6Q9R1R0 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC18.84■□□□□ 0.61
Lhx6Q9R1R0 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.84■□□□□ 0.61
Lhx6Q9R1R0 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lhx6Q9R1R0 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lhx6Q9R1R0 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lhx6Q9R1R0 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.83■□□□□ 0.61
Lhx6Q9R1R0 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
Lhx6Q9R1R0 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Lhx6Q9R1R0 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Lhx6Q9R1R0 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.83■□□□□ 0.6
Lhx6Q9R1R0 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lhx6Q9R1R0 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lhx6Q9R1R0 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lhx6Q9R1R0 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Lhx6Q9R1R0 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.82■□□□□ 0.6
Lhx6Q9R1R0 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lhx6Q9R1R0 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.82■□□□□ 0.6
Lhx6Q9R1R0 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lhx6Q9R1R0 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lhx6Q9R1R0 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Lhx6Q9R1R0 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lhx6Q9R1R0 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lhx6Q9R1R0 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Lhx6Q9R1R0 Gm9870-201ENSMUST00000063874 645 ntBASIC18.81■□□□□ 0.6
Lhx6Q9R1R0 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lhx6Q9R1R0 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lhx6Q9R1R0 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lhx6Q9R1R0 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.81■□□□□ 0.6
Lhx6Q9R1R0 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Lhx6Q9R1R0 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lhx6Q9R1R0 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Lhx6Q9R1R0 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lhx6Q9R1R0 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lhx6Q9R1R0 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.8■□□□□ 0.6
Lhx6Q9R1R0 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.8■□□□□ 0.6
Lhx6Q9R1R0 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lhx6Q9R1R0 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lhx6Q9R1R0 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
Lhx6Q9R1R0 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Lhx6Q9R1R0 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lhx6Q9R1R0 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Lhx6Q9R1R0 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lhx6Q9R1R0 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.79■□□□□ 0.6
Lhx6Q9R1R0 Gm18558-201ENSMUST00000186253 1214 ntBASIC18.79■□□□□ 0.6
Lhx6Q9R1R0 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lhx6Q9R1R0 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lhx6Q9R1R0 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lhx6Q9R1R0 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Lhx6Q9R1R0 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lhx6Q9R1R0 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Lhx6Q9R1R0 Gm22240-201ENSMUST00000175225 82 ntBASIC18.78■□□□□ 0.6
Lhx6Q9R1R0 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Lhx6Q9R1R0 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lhx6Q9R1R0 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lhx6Q9R1R0 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Lhx6Q9R1R0 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.77■□□□□ 0.6
Lhx6Q9R1R0 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.77■□□□□ 0.6
Lhx6Q9R1R0 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Lhx6Q9R1R0 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lhx6Q9R1R0 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lhx6Q9R1R0 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lhx6Q9R1R0 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lhx6Q9R1R0 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lhx6Q9R1R0 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
Lhx6Q9R1R0 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Lhx6Q9R1R0 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Lhx6Q9R1R0 Gm12933-201ENSMUST00000120203 872 ntBASIC18.76■□□□□ 0.59
Lhx6Q9R1R0 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.76■□□□□ 0.59
Lhx6Q9R1R0 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lhx6Q9R1R0 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lhx6Q9R1R0 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lhx6Q9R1R0 Notumos-201ENSMUST00000151998 2659 ntBASIC18.76■□□□□ 0.59
Lhx6Q9R1R0 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC18.75■□□□□ 0.59
Lhx6Q9R1R0 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Lhx6Q9R1R0 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lhx6Q9R1R0 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lhx6Q9R1R0 Gm12251-201ENSMUST00000117893 792 ntBASIC18.75■□□□□ 0.59
Lhx6Q9R1R0 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.75■□□□□ 0.59
Lhx6Q9R1R0 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Lhx6Q9R1R0 Gm10033-202ENSMUST00000211874 928 ntBASIC18.75■□□□□ 0.59
Lhx6Q9R1R0 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lhx6Q9R1R0 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lhx6Q9R1R0 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lhx6Q9R1R0 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lhx6Q9R1R0 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Lhx6Q9R1R0 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lhx6Q9R1R0 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.74■□□□□ 0.59
Lhx6Q9R1R0 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lhx6Q9R1R0 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Lhx6Q9R1R0 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
Lhx6Q9R1R0 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lhx6Q9R1R0 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lhx6Q9R1R0 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lhx6Q9R1R0 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lhx6Q9R1R0 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Lhx6Q9R1R0 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lhx6Q9R1R0 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lhx6Q9R1R0 Gm10653-202ENSMUST00000139570 835 ntBASIC18.73■□□□□ 0.59
Lhx6Q9R1R0 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 143 ms