Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.88■□□□□ 0.93
Col4a4Q9QZR9 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col4a4Q9QZR9 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col4a4Q9QZR9 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Col4a4Q9QZR9 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col4a4Q9QZR9 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col4a4Q9QZR9 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Col4a4Q9QZR9 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col4a4Q9QZR9 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC20.87■□□□□ 0.93
Col4a4Q9QZR9 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Col4a4Q9QZR9 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.87■□□□□ 0.93
Col4a4Q9QZR9 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Col4a4Q9QZR9 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.87■□□□□ 0.93
Col4a4Q9QZR9 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col4a4Q9QZR9 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Col4a4Q9QZR9 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.86■□□□□ 0.93
Col4a4Q9QZR9 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.86■□□□□ 0.93
Col4a4Q9QZR9 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Col4a4Q9QZR9 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Col4a4Q9QZR9 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Col4a4Q9QZR9 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Col4a4Q9QZR9 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Col4a4Q9QZR9 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC20.86■□□□□ 0.93
Col4a4Q9QZR9 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.86■□□□□ 0.93
Col4a4Q9QZR9 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col4a4Q9QZR9 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col4a4Q9QZR9 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Col4a4Q9QZR9 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Col4a4Q9QZR9 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col4a4Q9QZR9 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col4a4Q9QZR9 Gm12527-201ENSMUST00000117967 564 ntBASIC20.85■□□□□ 0.93
Col4a4Q9QZR9 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.85■□□□□ 0.93
Col4a4Q9QZR9 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Col4a4Q9QZR9 Gm7514-201ENSMUST00000209475 934 ntBASIC20.85■□□□□ 0.93
Col4a4Q9QZR9 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.84■□□□□ 0.93
Col4a4Q9QZR9 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col4a4Q9QZR9 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col4a4Q9QZR9 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Col4a4Q9QZR9 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col4a4Q9QZR9 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC20.83■□□□□ 0.93
Col4a4Q9QZR9 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.83■□□□□ 0.93
Col4a4Q9QZR9 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Col4a4Q9QZR9 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Col4a4Q9QZR9 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Col4a4Q9QZR9 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC20.83■□□□□ 0.92
Col4a4Q9QZR9 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
Col4a4Q9QZR9 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.83■□□□□ 0.92
Col4a4Q9QZR9 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Col4a4Q9QZR9 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Col4a4Q9QZR9 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Col4a4Q9QZR9 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Col4a4Q9QZR9 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC20.82■□□□□ 0.92
Col4a4Q9QZR9 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Col4a4Q9QZR9 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Col4a4Q9QZR9 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Col4a4Q9QZR9 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Col4a4Q9QZR9 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Col4a4Q9QZR9 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Col4a4Q9QZR9 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Col4a4Q9QZR9 Gm22240-201ENSMUST00000175225 82 ntBASIC20.81■□□□□ 0.92
Col4a4Q9QZR9 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC20.81■□□□□ 0.92
Col4a4Q9QZR9 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Col4a4Q9QZR9 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Col4a4Q9QZR9 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Col4a4Q9QZR9 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.8■□□□□ 0.92
Col4a4Q9QZR9 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Col4a4Q9QZR9 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Col4a4Q9QZR9 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Col4a4Q9QZR9 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.8■□□□□ 0.92
Col4a4Q9QZR9 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC20.8■□□□□ 0.92
Col4a4Q9QZR9 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Col4a4Q9QZR9 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Col4a4Q9QZR9 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Col4a4Q9QZR9 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Col4a4Q9QZR9 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Col4a4Q9QZR9 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.79■□□□□ 0.92
Col4a4Q9QZR9 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Col4a4Q9QZR9 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Col4a4Q9QZR9 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Col4a4Q9QZR9 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
Col4a4Q9QZR9 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Col4a4Q9QZR9 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Col4a4Q9QZR9 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC20.77■□□□□ 0.92
Col4a4Q9QZR9 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Col4a4Q9QZR9 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Col4a4Q9QZR9 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Col4a4Q9QZR9 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Col4a4Q9QZR9 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Col4a4Q9QZR9 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Col4a4Q9QZR9 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Col4a4Q9QZR9 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Col4a4Q9QZR9 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Col4a4Q9QZR9 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.76■□□□□ 0.91
Col4a4Q9QZR9 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Col4a4Q9QZR9 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.76■□□□□ 0.91
Col4a4Q9QZR9 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col4a4Q9QZR9 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col4a4Q9QZR9 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col4a4Q9QZR9 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col4a4Q9QZR9 Gm13168-201ENSMUST00000121771 632 ntBASIC20.75■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms