Protein–RNA interactions for Protein: Q9D9P8

Llcfc1, LLLL and CFNLAS motif-containing protein 1, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Llcfc1Q9D9P8 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Llcfc1Q9D9P8 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Llcfc1Q9D9P8 Gm5921-201ENSMUST00000075898 882 ntBASIC21.37■■□□□ 1.01
Llcfc1Q9D9P8 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Llcfc1Q9D9P8 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Llcfc1Q9D9P8 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Llcfc1Q9D9P8 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Llcfc1Q9D9P8 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Llcfc1Q9D9P8 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Llcfc1Q9D9P8 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Llcfc1Q9D9P8 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Llcfc1Q9D9P8 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Llcfc1Q9D9P8 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Llcfc1Q9D9P8 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Llcfc1Q9D9P8 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Llcfc1Q9D9P8 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Llcfc1Q9D9P8 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Llcfc1Q9D9P8 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC21.35■■□□□ 1.01
Llcfc1Q9D9P8 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Llcfc1Q9D9P8 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Llcfc1Q9D9P8 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Llcfc1Q9D9P8 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Llcfc1Q9D9P8 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC21.34■■□□□ 1.01
Llcfc1Q9D9P8 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Llcfc1Q9D9P8 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Llcfc1Q9D9P8 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Llcfc1Q9D9P8 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Llcfc1Q9D9P8 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Llcfc1Q9D9P8 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Llcfc1Q9D9P8 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Llcfc1Q9D9P8 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Llcfc1Q9D9P8 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC21.33■■□□□ 1.01
Llcfc1Q9D9P8 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Llcfc1Q9D9P8 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Llcfc1Q9D9P8 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
Llcfc1Q9D9P8 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Llcfc1Q9D9P8 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Llcfc1Q9D9P8 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Llcfc1Q9D9P8 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC21.32■■□□□ 1
Llcfc1Q9D9P8 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Llcfc1Q9D9P8 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Llcfc1Q9D9P8 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Llcfc1Q9D9P8 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Llcfc1Q9D9P8 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC21.31■■□□□ 1
Llcfc1Q9D9P8 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Llcfc1Q9D9P8 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Llcfc1Q9D9P8 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Llcfc1Q9D9P8 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Llcfc1Q9D9P8 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Llcfc1Q9D9P8 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC21.31■■□□□ 1
Llcfc1Q9D9P8 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC21.31■■□□□ 1
Llcfc1Q9D9P8 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC21.3■■□□□ 1
Llcfc1Q9D9P8 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC21.3■■□□□ 1
Llcfc1Q9D9P8 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Llcfc1Q9D9P8 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Llcfc1Q9D9P8 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Llcfc1Q9D9P8 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Llcfc1Q9D9P8 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC21.29■■□□□ 1
Llcfc1Q9D9P8 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Llcfc1Q9D9P8 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC21.29■■□□□ 1
Llcfc1Q9D9P8 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC21.29■■□□□ 1
Llcfc1Q9D9P8 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Llcfc1Q9D9P8 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC21.29■■□□□ 1
Llcfc1Q9D9P8 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Llcfc1Q9D9P8 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Llcfc1Q9D9P8 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Llcfc1Q9D9P8 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Llcfc1Q9D9P8 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC21.29■■□□□ 1
Llcfc1Q9D9P8 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC21.29■■□□□ 1
Llcfc1Q9D9P8 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC21.28■■□□□ 1
Llcfc1Q9D9P8 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Llcfc1Q9D9P8 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC21.28■■□□□ 1
Llcfc1Q9D9P8 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Llcfc1Q9D9P8 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC21.28■■□□□ 1
Llcfc1Q9D9P8 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC21.28■■□□□ 1
Llcfc1Q9D9P8 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Llcfc1Q9D9P8 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Llcfc1Q9D9P8 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Llcfc1Q9D9P8 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Llcfc1Q9D9P8 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC21.27■■□□□ 1
Llcfc1Q9D9P8 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC21.27■■□□□ 1
Llcfc1Q9D9P8 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
Llcfc1Q9D9P8 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Llcfc1Q9D9P8 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Llcfc1Q9D9P8 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC21.26■□□□□ 0.99
Llcfc1Q9D9P8 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC21.26■□□□□ 0.99
Llcfc1Q9D9P8 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Llcfc1Q9D9P8 Gm10232-201ENSMUST00000089221 720 ntBASIC21.26■□□□□ 0.99
Llcfc1Q9D9P8 AC166356.1-201ENSMUST00000228236 1426 ntBASIC21.26■□□□□ 0.99
Llcfc1Q9D9P8 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Llcfc1Q9D9P8 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC21.25■□□□□ 0.99
Llcfc1Q9D9P8 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Llcfc1Q9D9P8 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC21.25■□□□□ 0.99
Llcfc1Q9D9P8 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Llcfc1Q9D9P8 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Llcfc1Q9D9P8 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC21.25■□□□□ 0.99
Llcfc1Q9D9P8 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Llcfc1Q9D9P8 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Llcfc1Q9D9P8 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Llcfc1Q9D9P8 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms