Protein–RNA interactions for Protein: Q9D9H3

Mbd3l1, Methyl-CpG-binding domain protein 3-like 1, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd3l1Q9D9H3 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Mbd3l1Q9D9H3 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Mbd3l1Q9D9H3 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC17.52■□□□□ 0.39
Mbd3l1Q9D9H3 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Mbd3l1Q9D9H3 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Mbd3l1Q9D9H3 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Mbd3l1Q9D9H3 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Mbd3l1Q9D9H3 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Mbd3l1Q9D9H3 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Mbd3l1Q9D9H3 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Mbd3l1Q9D9H3 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Mbd3l1Q9D9H3 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Mbd3l1Q9D9H3 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Mbd3l1Q9D9H3 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Mbd3l1Q9D9H3 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.51■□□□□ 0.39
Mbd3l1Q9D9H3 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Mbd3l1Q9D9H3 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Mbd3l1Q9D9H3 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.5■□□□□ 0.39
Mbd3l1Q9D9H3 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Mbd3l1Q9D9H3 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Mbd3l1Q9D9H3 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Mbd3l1Q9D9H3 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Mbd3l1Q9D9H3 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Mbd3l1Q9D9H3 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Mbd3l1Q9D9H3 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Mbd3l1Q9D9H3 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Mbd3l1Q9D9H3 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.49■□□□□ 0.39
Mbd3l1Q9D9H3 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Mbd3l1Q9D9H3 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Mbd3l1Q9D9H3 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Mbd3l1Q9D9H3 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Mbd3l1Q9D9H3 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
Mbd3l1Q9D9H3 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Mbd3l1Q9D9H3 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Mbd3l1Q9D9H3 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Mbd3l1Q9D9H3 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Mbd3l1Q9D9H3 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Mbd3l1Q9D9H3 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Mbd3l1Q9D9H3 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Mbd3l1Q9D9H3 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Mbd3l1Q9D9H3 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Mbd3l1Q9D9H3 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Mbd3l1Q9D9H3 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Mbd3l1Q9D9H3 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Mbd3l1Q9D9H3 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Mbd3l1Q9D9H3 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Mbd3l1Q9D9H3 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Mbd3l1Q9D9H3 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Mbd3l1Q9D9H3 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Mbd3l1Q9D9H3 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Mbd3l1Q9D9H3 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Mbd3l1Q9D9H3 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Mbd3l1Q9D9H3 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC17.47■□□□□ 0.39
Mbd3l1Q9D9H3 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Mbd3l1Q9D9H3 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Mbd3l1Q9D9H3 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Mbd3l1Q9D9H3 Rarb-207ENSMUST00000225921 2756 ntBASIC17.47■□□□□ 0.39
Mbd3l1Q9D9H3 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Mbd3l1Q9D9H3 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Mbd3l1Q9D9H3 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Mbd3l1Q9D9H3 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Mbd3l1Q9D9H3 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.47■□□□□ 0.39
Mbd3l1Q9D9H3 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.47■□□□□ 0.39
Mbd3l1Q9D9H3 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Mbd3l1Q9D9H3 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Mbd3l1Q9D9H3 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Mbd3l1Q9D9H3 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Mbd3l1Q9D9H3 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Mbd3l1Q9D9H3 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Mbd3l1Q9D9H3 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Mbd3l1Q9D9H3 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Mbd3l1Q9D9H3 AC122428.2-201ENSMUST00000216321 1832 ntBASIC17.46■□□□□ 0.39
Mbd3l1Q9D9H3 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Mbd3l1Q9D9H3 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Mbd3l1Q9D9H3 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Mbd3l1Q9D9H3 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Mbd3l1Q9D9H3 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Mbd3l1Q9D9H3 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Mbd3l1Q9D9H3 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Mbd3l1Q9D9H3 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Mbd3l1Q9D9H3 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.45■□□□□ 0.38
Mbd3l1Q9D9H3 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Mbd3l1Q9D9H3 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Mbd3l1Q9D9H3 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Mbd3l1Q9D9H3 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Mbd3l1Q9D9H3 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Mbd3l1Q9D9H3 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Mbd3l1Q9D9H3 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Mbd3l1Q9D9H3 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.44■□□□□ 0.38
Mbd3l1Q9D9H3 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Mbd3l1Q9D9H3 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Mbd3l1Q9D9H3 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Mbd3l1Q9D9H3 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Mbd3l1Q9D9H3 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Mbd3l1Q9D9H3 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Mbd3l1Q9D9H3 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Mbd3l1Q9D9H3 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Mbd3l1Q9D9H3 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Mbd3l1Q9D9H3 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Mbd3l1Q9D9H3 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms