Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhb2Q91Y00 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhb2Q91Y00 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhb2Q91Y00 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhb2Q91Y00 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhb2Q91Y00 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhb2Q91Y00 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhb2Q91Y00 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhb2Q91Y00 Gm8770-201ENSMUST00000121113 1109 ntBASIC21.46■■□□□ 1.03
Pcdhb2Q91Y00 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhb2Q91Y00 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC21.46■■□□□ 1.03
Pcdhb2Q91Y00 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC21.46■■□□□ 1.03
Pcdhb2Q91Y00 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhb2Q91Y00 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC21.46■■□□□ 1.03
Pcdhb2Q91Y00 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC21.46■■□□□ 1.03
Pcdhb2Q91Y00 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhb2Q91Y00 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhb2Q91Y00 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhb2Q91Y00 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhb2Q91Y00 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhb2Q91Y00 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.45■■□□□ 1.03
Pcdhb2Q91Y00 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhb2Q91Y00 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhb2Q91Y00 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhb2Q91Y00 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhb2Q91Y00 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhb2Q91Y00 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC21.45■■□□□ 1.02
Pcdhb2Q91Y00 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhb2Q91Y00 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhb2Q91Y00 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC21.45■■□□□ 1.02
Pcdhb2Q91Y00 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhb2Q91Y00 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Pcdhb2Q91Y00 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhb2Q91Y00 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhb2Q91Y00 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.44■■□□□ 1.02
Pcdhb2Q91Y00 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhb2Q91Y00 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Pcdhb2Q91Y00 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhb2Q91Y00 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
Pcdhb2Q91Y00 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhb2Q91Y00 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.44■■□□□ 1.02
Pcdhb2Q91Y00 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhb2Q91Y00 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhb2Q91Y00 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhb2Q91Y00 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhb2Q91Y00 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
Pcdhb2Q91Y00 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Pcdhb2Q91Y00 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Pcdhb2Q91Y00 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhb2Q91Y00 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhb2Q91Y00 AC166356.1-201ENSMUST00000228236 1426 ntBASIC21.43■■□□□ 1.02
Pcdhb2Q91Y00 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhb2Q91Y00 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhb2Q91Y00 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhb2Q91Y00 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhb2Q91Y00 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhb2Q91Y00 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdhb2Q91Y00 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
Pcdhb2Q91Y00 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdhb2Q91Y00 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdhb2Q91Y00 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdhb2Q91Y00 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdhb2Q91Y00 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdhb2Q91Y00 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdhb2Q91Y00 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdhb2Q91Y00 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdhb2Q91Y00 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdhb2Q91Y00 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdhb2Q91Y00 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhb2Q91Y00 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhb2Q91Y00 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC21.4■■□□□ 1.02
Pcdhb2Q91Y00 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhb2Q91Y00 AC122428.2-201ENSMUST00000216321 1832 ntBASIC21.4■■□□□ 1.02
Pcdhb2Q91Y00 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhb2Q91Y00 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Pcdhb2Q91Y00 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdhb2Q91Y00 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC21.39■■□□□ 1.01
Pcdhb2Q91Y00 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC21.39■■□□□ 1.01
Pcdhb2Q91Y00 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdhb2Q91Y00 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdhb2Q91Y00 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdhb2Q91Y00 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.38■■□□□ 1.01
Pcdhb2Q91Y00 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdhb2Q91Y00 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC21.38■■□□□ 1.01
Pcdhb2Q91Y00 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC21.38■■□□□ 1.01
Pcdhb2Q91Y00 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdhb2Q91Y00 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Pcdhb2Q91Y00 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhb2Q91Y00 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhb2Q91Y00 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhb2Q91Y00 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Pcdhb2Q91Y00 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhb2Q91Y00 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhb2Q91Y00 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Pcdhb2Q91Y00 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhb2Q91Y00 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhb2Q91Y00 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Pcdhb2Q91Y00 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhb2Q91Y00 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhb2Q91Y00 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC21.36■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 88.2 ms