Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim60Q8VI40 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.92■□□□□ 0.94
Trim60Q8VI40 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Trim60Q8VI40 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.92■□□□□ 0.94
Trim60Q8VI40 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Trim60Q8VI40 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim60Q8VI40 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim60Q8VI40 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim60Q8VI40 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Trim60Q8VI40 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim60Q8VI40 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Trim60Q8VI40 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.92■□□□□ 0.94
Trim60Q8VI40 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Trim60Q8VI40 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Trim60Q8VI40 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim60Q8VI40 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
Trim60Q8VI40 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.92■□□□□ 0.94
Trim60Q8VI40 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.91■□□□□ 0.94
Trim60Q8VI40 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.91■□□□□ 0.94
Trim60Q8VI40 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Trim60Q8VI40 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim60Q8VI40 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim60Q8VI40 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim60Q8VI40 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Trim60Q8VI40 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Trim60Q8VI40 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.9■□□□□ 0.94
Trim60Q8VI40 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.9■□□□□ 0.94
Trim60Q8VI40 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Trim60Q8VI40 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim60Q8VI40 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim60Q8VI40 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Trim60Q8VI40 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Trim60Q8VI40 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.89■□□□□ 0.94
Trim60Q8VI40 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim60Q8VI40 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim60Q8VI40 Gm5921-201ENSMUST00000075898 882 ntBASIC20.89■□□□□ 0.93
Trim60Q8VI40 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim60Q8VI40 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim60Q8VI40 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim60Q8VI40 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.89■□□□□ 0.93
Trim60Q8VI40 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim60Q8VI40 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Trim60Q8VI40 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Trim60Q8VI40 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim60Q8VI40 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim60Q8VI40 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim60Q8VI40 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim60Q8VI40 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim60Q8VI40 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim60Q8VI40 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim60Q8VI40 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim60Q8VI40 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim60Q8VI40 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim60Q8VI40 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim60Q8VI40 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Trim60Q8VI40 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim60Q8VI40 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim60Q8VI40 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim60Q8VI40 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim60Q8VI40 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim60Q8VI40 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim60Q8VI40 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim60Q8VI40 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.85■□□□□ 0.93
Trim60Q8VI40 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim60Q8VI40 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim60Q8VI40 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim60Q8VI40 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim60Q8VI40 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim60Q8VI40 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.84■□□□□ 0.93
Trim60Q8VI40 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Trim60Q8VI40 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim60Q8VI40 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Trim60Q8VI40 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim60Q8VI40 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim60Q8VI40 Gm13238-201ENSMUST00000117655 780 ntBASIC20.83■□□□□ 0.93
Trim60Q8VI40 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.83■□□□□ 0.93
Trim60Q8VI40 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.83■□□□□ 0.93
Trim60Q8VI40 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim60Q8VI40 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.83■□□□□ 0.93
Trim60Q8VI40 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Trim60Q8VI40 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim60Q8VI40 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim60Q8VI40 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Trim60Q8VI40 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Trim60Q8VI40 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim60Q8VI40 Gm10232-201ENSMUST00000089221 720 ntBASIC20.82■□□□□ 0.92
Trim60Q8VI40 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim60Q8VI40 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim60Q8VI40 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Trim60Q8VI40 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim60Q8VI40 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim60Q8VI40 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Trim60Q8VI40 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Trim60Q8VI40 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim60Q8VI40 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim60Q8VI40 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Trim60Q8VI40 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim60Q8VI40 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim60Q8VI40 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim60Q8VI40 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 101.4 ms