Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC24.99■■□□□ 1.59
Smc4Q8CG47 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC24.99■■□□□ 1.59
Smc4Q8CG47 Gm32051-202ENSMUST00000197905 2385 ntBASIC24.98■■□□□ 1.59
Smc4Q8CG47 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC24.98■■□□□ 1.59
Smc4Q8CG47 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC24.98■■□□□ 1.59
Smc4Q8CG47 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Smc4Q8CG47 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Smc4Q8CG47 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Smc4Q8CG47 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC24.98■■□□□ 1.59
Smc4Q8CG47 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Smc4Q8CG47 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Smc4Q8CG47 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC24.98■■□□□ 1.59
Smc4Q8CG47 Gm17641-201ENSMUST00000166328 2350 ntBASIC24.98■■□□□ 1.59
Smc4Q8CG47 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
Smc4Q8CG47 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Smc4Q8CG47 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
Smc4Q8CG47 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC24.98■■□□□ 1.59
Smc4Q8CG47 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
Smc4Q8CG47 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
Smc4Q8CG47 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Smc4Q8CG47 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Smc4Q8CG47 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Smc4Q8CG47 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Smc4Q8CG47 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC24.97■■□□□ 1.59
Smc4Q8CG47 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC24.97■■□□□ 1.59
Smc4Q8CG47 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC24.97■■□□□ 1.59
Smc4Q8CG47 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Smc4Q8CG47 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Smc4Q8CG47 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC24.96■■□□□ 1.59
Smc4Q8CG47 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
Smc4Q8CG47 Spcs1-204ENSMUST00000226782 949 ntBASIC24.96■■□□□ 1.59
Smc4Q8CG47 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC24.96■■□□□ 1.59
Smc4Q8CG47 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Smc4Q8CG47 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC24.96■■□□□ 1.59
Smc4Q8CG47 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Smc4Q8CG47 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC24.96■■□□□ 1.59
Smc4Q8CG47 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.59
Smc4Q8CG47 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC24.95■■□□□ 1.58
Smc4Q8CG47 Gm43017-201ENSMUST00000198296 752 ntBASIC24.95■■□□□ 1.58
Smc4Q8CG47 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Smc4Q8CG47 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC24.95■■□□□ 1.58
Smc4Q8CG47 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Smc4Q8CG47 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Smc4Q8CG47 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Smc4Q8CG47 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Smc4Q8CG47 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Smc4Q8CG47 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Smc4Q8CG47 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Smc4Q8CG47 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Smc4Q8CG47 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC24.94■■□□□ 1.58
Smc4Q8CG47 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC24.94■■□□□ 1.58
Smc4Q8CG47 Mir6236-201ENSMUST00000184437 123 ntBASIC24.94■■□□□ 1.58
Smc4Q8CG47 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Smc4Q8CG47 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC24.94■■□□□ 1.58
Smc4Q8CG47 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC24.94■■□□□ 1.58
Smc4Q8CG47 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
Smc4Q8CG47 Gm21168-201ENSMUST00000199646 1096 ntBASIC24.93■■□□□ 1.58
Smc4Q8CG47 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Smc4Q8CG47 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Smc4Q8CG47 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Smc4Q8CG47 Gm27045-201ENSMUST00000182145 1402 ntBASIC24.93■■□□□ 1.58
Smc4Q8CG47 Gm10209-201ENSMUST00000203397 1607 ntBASIC24.93■■□□□ 1.58
Smc4Q8CG47 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC24.93■■□□□ 1.58
Smc4Q8CG47 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Smc4Q8CG47 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Smc4Q8CG47 Gm6085-201ENSMUST00000182774 1470 ntBASIC24.92■■□□□ 1.58
Smc4Q8CG47 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC24.92■■□□□ 1.58
Smc4Q8CG47 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC24.92■■□□□ 1.58
Smc4Q8CG47 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC24.92■■□□□ 1.58
Smc4Q8CG47 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Smc4Q8CG47 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
Smc4Q8CG47 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC24.92■■□□□ 1.58
Smc4Q8CG47 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Smc4Q8CG47 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC24.92■■□□□ 1.58
Smc4Q8CG47 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Smc4Q8CG47 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Smc4Q8CG47 Gm12251-201ENSMUST00000117893 792 ntBASIC24.91■■□□□ 1.58
Smc4Q8CG47 Gm43173-201ENSMUST00000202246 593 ntBASIC24.91■■□□□ 1.58
Smc4Q8CG47 Gm2011-201ENSMUST00000203124 1263 ntBASIC24.91■■□□□ 1.58
Smc4Q8CG47 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Smc4Q8CG47 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Smc4Q8CG47 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC24.91■■□□□ 1.58
Smc4Q8CG47 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC24.9■■□□□ 1.58
Smc4Q8CG47 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Smc4Q8CG47 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Smc4Q8CG47 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC24.9■■□□□ 1.58
Smc4Q8CG47 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC24.9■■□□□ 1.58
Smc4Q8CG47 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Smc4Q8CG47 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Smc4Q8CG47 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC24.9■■□□□ 1.58
Smc4Q8CG47 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC24.89■■□□□ 1.58
Smc4Q8CG47 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Smc4Q8CG47 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Smc4Q8CG47 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Smc4Q8CG47 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Smc4Q8CG47 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Smc4Q8CG47 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Smc4Q8CG47 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Smc4Q8CG47 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC24.89■■□□□ 1.58
Smc4Q8CG47 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms