Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Trim52Q8CDV4 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Trim52Q8CDV4 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Trim52Q8CDV4 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Trim52Q8CDV4 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
Trim52Q8CDV4 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Trim52Q8CDV4 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Trim52Q8CDV4 AC122428.2-201ENSMUST00000216321 1832 ntBASIC25.32■■□□□ 1.64
Trim52Q8CDV4 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Trim52Q8CDV4 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Trim52Q8CDV4 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Trim52Q8CDV4 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Trim52Q8CDV4 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC25.31■■□□□ 1.64
Trim52Q8CDV4 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
Trim52Q8CDV4 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Trim52Q8CDV4 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Trim52Q8CDV4 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
Trim52Q8CDV4 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Trim52Q8CDV4 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
Trim52Q8CDV4 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Trim52Q8CDV4 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Trim52Q8CDV4 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Trim52Q8CDV4 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Trim52Q8CDV4 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Trim52Q8CDV4 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Trim52Q8CDV4 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
Trim52Q8CDV4 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Trim52Q8CDV4 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Trim52Q8CDV4 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
Trim52Q8CDV4 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Trim52Q8CDV4 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC25.29■■□□□ 1.64
Trim52Q8CDV4 Mir6236-201ENSMUST00000184437 123 ntBASIC25.29■■□□□ 1.64
Trim52Q8CDV4 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Trim52Q8CDV4 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Trim52Q8CDV4 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC25.29■■□□□ 1.64
Trim52Q8CDV4 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Trim52Q8CDV4 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
Trim52Q8CDV4 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC25.28■■□□□ 1.64
Trim52Q8CDV4 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC25.28■■□□□ 1.64
Trim52Q8CDV4 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Trim52Q8CDV4 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Trim52Q8CDV4 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC25.28■■□□□ 1.64
Trim52Q8CDV4 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Trim52Q8CDV4 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Trim52Q8CDV4 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Trim52Q8CDV4 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC25.27■■□□□ 1.64
Trim52Q8CDV4 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
Trim52Q8CDV4 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Trim52Q8CDV4 Gm10493-201ENSMUST00000097270 612 ntBASIC25.27■■□□□ 1.64
Trim52Q8CDV4 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Trim52Q8CDV4 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Trim52Q8CDV4 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
Trim52Q8CDV4 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Trim52Q8CDV4 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC25.26■■□□□ 1.63
Trim52Q8CDV4 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Trim52Q8CDV4 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC25.26■■□□□ 1.63
Trim52Q8CDV4 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Trim52Q8CDV4 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC25.26■■□□□ 1.63
Trim52Q8CDV4 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Trim52Q8CDV4 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC25.25■■□□□ 1.63
Trim52Q8CDV4 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC25.25■■□□□ 1.63
Trim52Q8CDV4 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Trim52Q8CDV4 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC25.25■■□□□ 1.63
Trim52Q8CDV4 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Trim52Q8CDV4 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Trim52Q8CDV4 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Trim52Q8CDV4 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC25.24■■□□□ 1.63
Trim52Q8CDV4 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Trim52Q8CDV4 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Trim52Q8CDV4 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Trim52Q8CDV4 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Trim52Q8CDV4 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Trim52Q8CDV4 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Trim52Q8CDV4 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Trim52Q8CDV4 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Trim52Q8CDV4 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC25.22■■□□□ 1.63
Trim52Q8CDV4 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC25.22■■□□□ 1.63
Trim52Q8CDV4 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC25.22■■□□□ 1.63
Trim52Q8CDV4 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC25.22■■□□□ 1.63
Trim52Q8CDV4 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Trim52Q8CDV4 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC25.22■■□□□ 1.63
Trim52Q8CDV4 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Trim52Q8CDV4 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Trim52Q8CDV4 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Trim52Q8CDV4 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Trim52Q8CDV4 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
Trim52Q8CDV4 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Trim52Q8CDV4 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Trim52Q8CDV4 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC25.2■■□□□ 1.62
Trim52Q8CDV4 Gm10129-202ENSMUST00000193100 1316 ntBASIC25.2■■□□□ 1.62
Trim52Q8CDV4 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Trim52Q8CDV4 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Trim52Q8CDV4 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC25.19■■□□□ 1.62
Trim52Q8CDV4 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC25.19■■□□□ 1.62
Trim52Q8CDV4 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Trim52Q8CDV4 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Trim52Q8CDV4 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Trim52Q8CDV4 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC25.19■■□□□ 1.62
Trim52Q8CDV4 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC25.18■■□□□ 1.62
Trim52Q8CDV4 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC25.18■■□□□ 1.62
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms