Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Lysmd4Q8CC84 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lysmd4Q8CC84 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC18.17■□□□□ 0.5
Lysmd4Q8CC84 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lysmd4Q8CC84 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lysmd4Q8CC84 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lysmd4Q8CC84 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lysmd4Q8CC84 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lysmd4Q8CC84 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lysmd4Q8CC84 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Lysmd4Q8CC84 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lysmd4Q8CC84 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lysmd4Q8CC84 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Lysmd4Q8CC84 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lysmd4Q8CC84 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lysmd4Q8CC84 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.16■□□□□ 0.5
Lysmd4Q8CC84 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lysmd4Q8CC84 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Lysmd4Q8CC84 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lysmd4Q8CC84 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lysmd4Q8CC84 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Lysmd4Q8CC84 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.16■□□□□ 0.5
Lysmd4Q8CC84 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Lysmd4Q8CC84 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lysmd4Q8CC84 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lysmd4Q8CC84 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lysmd4Q8CC84 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
Lysmd4Q8CC84 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Lysmd4Q8CC84 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lysmd4Q8CC84 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Lysmd4Q8CC84 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC18.14■□□□□ 0.49
Lysmd4Q8CC84 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC18.14■□□□□ 0.49
Lysmd4Q8CC84 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.14■□□□□ 0.49
Lysmd4Q8CC84 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lysmd4Q8CC84 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lysmd4Q8CC84 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lysmd4Q8CC84 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.14■□□□□ 0.49
Lysmd4Q8CC84 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lysmd4Q8CC84 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lysmd4Q8CC84 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Lysmd4Q8CC84 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lysmd4Q8CC84 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lysmd4Q8CC84 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lysmd4Q8CC84 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lysmd4Q8CC84 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lysmd4Q8CC84 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lysmd4Q8CC84 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lysmd4Q8CC84 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lysmd4Q8CC84 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Lysmd4Q8CC84 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Lysmd4Q8CC84 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lysmd4Q8CC84 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lysmd4Q8CC84 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Lysmd4Q8CC84 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Lysmd4Q8CC84 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Lysmd4Q8CC84 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lysmd4Q8CC84 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lysmd4Q8CC84 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lysmd4Q8CC84 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lysmd4Q8CC84 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lysmd4Q8CC84 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lysmd4Q8CC84 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lysmd4Q8CC84 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lysmd4Q8CC84 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Lysmd4Q8CC84 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.1■□□□□ 0.49
Lysmd4Q8CC84 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Lysmd4Q8CC84 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lysmd4Q8CC84 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lysmd4Q8CC84 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lysmd4Q8CC84 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lysmd4Q8CC84 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.1■□□□□ 0.49
Lysmd4Q8CC84 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.1■□□□□ 0.49
Lysmd4Q8CC84 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lysmd4Q8CC84 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lysmd4Q8CC84 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Lysmd4Q8CC84 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Lysmd4Q8CC84 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Lysmd4Q8CC84 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Lysmd4Q8CC84 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC18.09■□□□□ 0.49
Lysmd4Q8CC84 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Lysmd4Q8CC84 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Lysmd4Q8CC84 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.09■□□□□ 0.49
Lysmd4Q8CC84 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Lysmd4Q8CC84 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Lysmd4Q8CC84 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Lysmd4Q8CC84 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Lysmd4Q8CC84 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Lysmd4Q8CC84 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Lysmd4Q8CC84 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Lysmd4Q8CC84 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Lysmd4Q8CC84 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Lysmd4Q8CC84 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.08■□□□□ 0.48
Lysmd4Q8CC84 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC18.08■□□□□ 0.48
Lysmd4Q8CC84 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Lysmd4Q8CC84 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.08■□□□□ 0.48
Lysmd4Q8CC84 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Lysmd4Q8CC84 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Lysmd4Q8CC84 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.07■□□□□ 0.48
Lysmd4Q8CC84 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lysmd4Q8CC84 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms