Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Scfd1Q8BRF7 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Scfd1Q8BRF7 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Scfd1Q8BRF7 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Scfd1Q8BRF7 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
Scfd1Q8BRF7 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Scfd1Q8BRF7 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC23.29■■□□□ 1.32
Scfd1Q8BRF7 Gm8495-201ENSMUST00000188740 694 ntBASIC23.29■■□□□ 1.32
Scfd1Q8BRF7 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Scfd1Q8BRF7 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Scfd1Q8BRF7 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Scfd1Q8BRF7 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Scfd1Q8BRF7 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC23.28■■□□□ 1.32
Scfd1Q8BRF7 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Scfd1Q8BRF7 Gm32051-202ENSMUST00000197905 2385 ntBASIC23.28■■□□□ 1.32
Scfd1Q8BRF7 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Scfd1Q8BRF7 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Scfd1Q8BRF7 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
Scfd1Q8BRF7 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC23.28■■□□□ 1.32
Scfd1Q8BRF7 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Scfd1Q8BRF7 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Scfd1Q8BRF7 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Scfd1Q8BRF7 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Scfd1Q8BRF7 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Scfd1Q8BRF7 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
Scfd1Q8BRF7 Gm26833-201ENSMUST00000180899 440 ntBASIC23.27■■□□□ 1.32
Scfd1Q8BRF7 Mir6236-201ENSMUST00000184437 123 ntBASIC23.27■■□□□ 1.32
Scfd1Q8BRF7 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Scfd1Q8BRF7 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Scfd1Q8BRF7 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Scfd1Q8BRF7 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Scfd1Q8BRF7 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
Scfd1Q8BRF7 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Scfd1Q8BRF7 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Scfd1Q8BRF7 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC23.26■■□□□ 1.31
Scfd1Q8BRF7 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Scfd1Q8BRF7 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC23.26■■□□□ 1.31
Scfd1Q8BRF7 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Scfd1Q8BRF7 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Scfd1Q8BRF7 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Scfd1Q8BRF7 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Scfd1Q8BRF7 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC23.25■■□□□ 1.31
Scfd1Q8BRF7 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
Scfd1Q8BRF7 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Scfd1Q8BRF7 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Scfd1Q8BRF7 Cdc34b-202ENSMUST00000188741 1252 ntBASIC23.25■■□□□ 1.31
Scfd1Q8BRF7 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC23.25■■□□□ 1.31
Scfd1Q8BRF7 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Scfd1Q8BRF7 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
Scfd1Q8BRF7 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Scfd1Q8BRF7 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Scfd1Q8BRF7 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Scfd1Q8BRF7 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Scfd1Q8BRF7 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC23.24■■□□□ 1.31
Scfd1Q8BRF7 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Scfd1Q8BRF7 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
Scfd1Q8BRF7 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Scfd1Q8BRF7 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Scfd1Q8BRF7 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Scfd1Q8BRF7 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Scfd1Q8BRF7 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Scfd1Q8BRF7 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Scfd1Q8BRF7 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Scfd1Q8BRF7 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Scfd1Q8BRF7 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC23.22■■□□□ 1.31
Scfd1Q8BRF7 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Scfd1Q8BRF7 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Scfd1Q8BRF7 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Scfd1Q8BRF7 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC23.22■■□□□ 1.31
Scfd1Q8BRF7 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Scfd1Q8BRF7 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Scfd1Q8BRF7 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Scfd1Q8BRF7 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Scfd1Q8BRF7 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC23.21■■□□□ 1.31
Scfd1Q8BRF7 Smad6-203ENSMUST00000179458 273 ntBASIC23.21■■□□□ 1.31
Scfd1Q8BRF7 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
Scfd1Q8BRF7 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Scfd1Q8BRF7 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Scfd1Q8BRF7 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC23.21■■□□□ 1.31
Scfd1Q8BRF7 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Scfd1Q8BRF7 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Scfd1Q8BRF7 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC23.2■■□□□ 1.3
Scfd1Q8BRF7 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
Scfd1Q8BRF7 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Scfd1Q8BRF7 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Scfd1Q8BRF7 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Scfd1Q8BRF7 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Scfd1Q8BRF7 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC23.19■■□□□ 1.3
Scfd1Q8BRF7 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Scfd1Q8BRF7 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Scfd1Q8BRF7 Gm17641-201ENSMUST00000166328 2350 ntBASIC23.19■■□□□ 1.3
Scfd1Q8BRF7 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Scfd1Q8BRF7 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC23.18■■□□□ 1.3
Scfd1Q8BRF7 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC23.18■■□□□ 1.3
Scfd1Q8BRF7 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Scfd1Q8BRF7 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Scfd1Q8BRF7 Gm43060-201ENSMUST00000200621 289 ntBASIC23.18■■□□□ 1.3
Scfd1Q8BRF7 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC23.18■■□□□ 1.3
Scfd1Q8BRF7 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Scfd1Q8BRF7 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms