Protein–RNA interactions for Protein: Q3ULM6

Uspl1, SUMO-specific isopeptidase USPL1, mousemouse

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uspl1Q3ULM6 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Uspl1Q3ULM6 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC26.35■■□□□ 1.81
Uspl1Q3ULM6 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Uspl1Q3ULM6 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Uspl1Q3ULM6 Gm13241-201ENSMUST00000094493 780 ntBASIC26.35■■□□□ 1.81
Uspl1Q3ULM6 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Uspl1Q3ULM6 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC26.35■■□□□ 1.81
Uspl1Q3ULM6 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Uspl1Q3ULM6 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Uspl1Q3ULM6 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Uspl1Q3ULM6 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Uspl1Q3ULM6 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Uspl1Q3ULM6 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
Uspl1Q3ULM6 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC26.33■■□□□ 1.81
Uspl1Q3ULM6 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Uspl1Q3ULM6 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Uspl1Q3ULM6 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Uspl1Q3ULM6 Hsf1-207ENSMUST00000228371 2102 ntBASIC26.32■■□□□ 1.8
Uspl1Q3ULM6 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Uspl1Q3ULM6 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Uspl1Q3ULM6 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Uspl1Q3ULM6 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Uspl1Q3ULM6 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC26.32■■□□□ 1.8
Uspl1Q3ULM6 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Uspl1Q3ULM6 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Uspl1Q3ULM6 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Uspl1Q3ULM6 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Uspl1Q3ULM6 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Uspl1Q3ULM6 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Uspl1Q3ULM6 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC26.31■■□□□ 1.8
Uspl1Q3ULM6 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
Uspl1Q3ULM6 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC26.3■■□□□ 1.8
Uspl1Q3ULM6 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Uspl1Q3ULM6 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
Uspl1Q3ULM6 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
Uspl1Q3ULM6 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Uspl1Q3ULM6 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC26.3■■□□□ 1.8
Uspl1Q3ULM6 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Uspl1Q3ULM6 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Uspl1Q3ULM6 Gm9207-201ENSMUST00000198773 1115 ntBASIC26.29■■□□□ 1.8
Uspl1Q3ULM6 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC26.29■■□□□ 1.8
Uspl1Q3ULM6 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Uspl1Q3ULM6 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
Uspl1Q3ULM6 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Uspl1Q3ULM6 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
Uspl1Q3ULM6 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Uspl1Q3ULM6 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Uspl1Q3ULM6 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Uspl1Q3ULM6 Gm43034-201ENSMUST00000198678 1364 ntBASIC26.28■■□□□ 1.8
Uspl1Q3ULM6 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Uspl1Q3ULM6 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
Uspl1Q3ULM6 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC26.28■■□□□ 1.8
Uspl1Q3ULM6 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Uspl1Q3ULM6 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Uspl1Q3ULM6 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
Uspl1Q3ULM6 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
Uspl1Q3ULM6 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC26.27■■□□□ 1.8
Uspl1Q3ULM6 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
Uspl1Q3ULM6 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC26.27■■□□□ 1.8
Uspl1Q3ULM6 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
Uspl1Q3ULM6 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Uspl1Q3ULM6 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC26.27■■□□□ 1.8
Uspl1Q3ULM6 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
Uspl1Q3ULM6 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC26.26■■□□□ 1.79
Uspl1Q3ULM6 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Uspl1Q3ULM6 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
Uspl1Q3ULM6 AC140930.3-201ENSMUST00000222935 274 ntBASIC26.25■■□□□ 1.79
Uspl1Q3ULM6 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Uspl1Q3ULM6 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC26.24■■□□□ 1.79
Uspl1Q3ULM6 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Uspl1Q3ULM6 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Uspl1Q3ULM6 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Uspl1Q3ULM6 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Uspl1Q3ULM6 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Uspl1Q3ULM6 Mir6236-201ENSMUST00000184437 123 ntBASIC26.24■■□□□ 1.79
Uspl1Q3ULM6 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC26.24■■□□□ 1.79
Uspl1Q3ULM6 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Uspl1Q3ULM6 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
Uspl1Q3ULM6 Gm27045-201ENSMUST00000182145 1402 ntBASIC26.23■■□□□ 1.79
Uspl1Q3ULM6 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Uspl1Q3ULM6 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
Uspl1Q3ULM6 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
Uspl1Q3ULM6 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Uspl1Q3ULM6 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Uspl1Q3ULM6 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
Uspl1Q3ULM6 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Uspl1Q3ULM6 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Uspl1Q3ULM6 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Uspl1Q3ULM6 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC26.22■■□□□ 1.79
Uspl1Q3ULM6 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC26.22■■□□□ 1.79
Uspl1Q3ULM6 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Uspl1Q3ULM6 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Uspl1Q3ULM6 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC26.22■■□□□ 1.79
Uspl1Q3ULM6 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Uspl1Q3ULM6 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Uspl1Q3ULM6 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Uspl1Q3ULM6 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Uspl1Q3ULM6 Gm43759-201ENSMUST00000196925 1261 ntBASIC26.21■■□□□ 1.79
Uspl1Q3ULM6 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Uspl1Q3ULM6 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms