Protein–RNA interactions for Protein: Q3U435

Mmp25, Matrix metalloproteinase-25, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp25Q3U435 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Mmp25Q3U435 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Mmp25Q3U435 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Mmp25Q3U435 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Mmp25Q3U435 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Mmp25Q3U435 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Mmp25Q3U435 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.06■□□□□ 0.64
Mmp25Q3U435 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Mmp25Q3U435 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Mmp25Q3U435 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Mmp25Q3U435 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Mmp25Q3U435 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Mmp25Q3U435 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Mmp25Q3U435 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Mmp25Q3U435 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Mmp25Q3U435 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Mmp25Q3U435 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Mmp25Q3U435 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Mmp25Q3U435 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Mmp25Q3U435 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.05■□□□□ 0.64
Mmp25Q3U435 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Mmp25Q3U435 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Mmp25Q3U435 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Mmp25Q3U435 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Mmp25Q3U435 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Mmp25Q3U435 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
Mmp25Q3U435 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.04■□□□□ 0.64
Mmp25Q3U435 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Mmp25Q3U435 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Mmp25Q3U435 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Mmp25Q3U435 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Mmp25Q3U435 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Mmp25Q3U435 Gm12821-201ENSMUST00000120022 600 ntBASIC19.03■□□□□ 0.64
Mmp25Q3U435 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Mmp25Q3U435 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.03■□□□□ 0.64
Mmp25Q3U435 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Mmp25Q3U435 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Mmp25Q3U435 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Mmp25Q3U435 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Mmp25Q3U435 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Mmp25Q3U435 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.02■□□□□ 0.64
Mmp25Q3U435 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Mmp25Q3U435 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Mmp25Q3U435 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Mmp25Q3U435 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Mmp25Q3U435 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.01■□□□□ 0.63
Mmp25Q3U435 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Mmp25Q3U435 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.01■□□□□ 0.63
Mmp25Q3U435 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.01■□□□□ 0.63
Mmp25Q3U435 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.01■□□□□ 0.63
Mmp25Q3U435 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Mmp25Q3U435 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Mmp25Q3U435 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Mmp25Q3U435 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Mmp25Q3U435 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Mmp25Q3U435 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Mmp25Q3U435 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19■□□□□ 0.63
Mmp25Q3U435 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Mmp25Q3U435 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Mmp25Q3U435 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Mmp25Q3U435 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Mmp25Q3U435 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Mmp25Q3U435 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Mmp25Q3U435 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Mmp25Q3U435 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19■□□□□ 0.63
Mmp25Q3U435 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19■□□□□ 0.63
Mmp25Q3U435 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19■□□□□ 0.63
Mmp25Q3U435 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Mmp25Q3U435 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Mmp25Q3U435 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Mmp25Q3U435 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Mmp25Q3U435 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19■□□□□ 0.63
Mmp25Q3U435 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.99■□□□□ 0.63
Mmp25Q3U435 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Mmp25Q3U435 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Mmp25Q3U435 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC18.99■□□□□ 0.63
Mmp25Q3U435 Mir6236-201ENSMUST00000184437 123 ntBASIC18.99■□□□□ 0.63
Mmp25Q3U435 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC18.99■□□□□ 0.63
Mmp25Q3U435 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Mmp25Q3U435 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Mmp25Q3U435 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Mmp25Q3U435 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Mmp25Q3U435 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Mmp25Q3U435 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Mmp25Q3U435 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
Mmp25Q3U435 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Mmp25Q3U435 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Mmp25Q3U435 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Mmp25Q3U435 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Mmp25Q3U435 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Mmp25Q3U435 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Mmp25Q3U435 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Mmp25Q3U435 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Mmp25Q3U435 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.97■□□□□ 0.63
Mmp25Q3U435 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Mmp25Q3U435 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
Mmp25Q3U435 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Mmp25Q3U435 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Mmp25Q3U435 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.96■□□□□ 0.63
Mmp25Q3U435 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms