Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cacna1aP97445 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Cacna1aP97445 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cacna1aP97445 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
Cacna1aP97445 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.73■□□□□ 0.59
Cacna1aP97445 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.73■□□□□ 0.59
Cacna1aP97445 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cacna1aP97445 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cacna1aP97445 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cacna1aP97445 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC18.73■□□□□ 0.59
Cacna1aP97445 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.73■□□□□ 0.59
Cacna1aP97445 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Cacna1aP97445 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cacna1aP97445 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cacna1aP97445 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cacna1aP97445 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cacna1aP97445 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.72■□□□□ 0.59
Cacna1aP97445 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cacna1aP97445 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cacna1aP97445 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cacna1aP97445 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cacna1aP97445 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cacna1aP97445 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Cacna1aP97445 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cacna1aP97445 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.71■□□□□ 0.59
Cacna1aP97445 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cacna1aP97445 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cacna1aP97445 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cacna1aP97445 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.7■□□□□ 0.58
Cacna1aP97445 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cacna1aP97445 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cacna1aP97445 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cacna1aP97445 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cacna1aP97445 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cacna1aP97445 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.69■□□□□ 0.58
Cacna1aP97445 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cacna1aP97445 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cacna1aP97445 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cacna1aP97445 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.69■□□□□ 0.58
Cacna1aP97445 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cacna1aP97445 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cacna1aP97445 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Cacna1aP97445 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Cacna1aP97445 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cacna1aP97445 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Cacna1aP97445 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cacna1aP97445 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cacna1aP97445 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Cacna1aP97445 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cacna1aP97445 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Cacna1aP97445 Gm18671-201ENSMUST00000214826 683 ntBASIC18.68■□□□□ 0.58
Cacna1aP97445 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cacna1aP97445 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cacna1aP97445 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Cacna1aP97445 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cacna1aP97445 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cacna1aP97445 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Cacna1aP97445 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cacna1aP97445 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cacna1aP97445 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cacna1aP97445 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cacna1aP97445 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Cacna1aP97445 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cacna1aP97445 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cacna1aP97445 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cacna1aP97445 Gm22240-201ENSMUST00000175225 82 ntBASIC18.67■□□□□ 0.58
Cacna1aP97445 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.67■□□□□ 0.58
Cacna1aP97445 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.67■□□□□ 0.58
Cacna1aP97445 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Cacna1aP97445 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC18.67■□□□□ 0.58
Cacna1aP97445 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.67■□□□□ 0.58
Cacna1aP97445 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cacna1aP97445 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.67■□□□□ 0.58
Cacna1aP97445 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cacna1aP97445 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.67■□□□□ 0.58
Cacna1aP97445 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cacna1aP97445 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.66■□□□□ 0.58
Cacna1aP97445 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cacna1aP97445 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Cacna1aP97445 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cacna1aP97445 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.66■□□□□ 0.58
Cacna1aP97445 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cacna1aP97445 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cacna1aP97445 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cacna1aP97445 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Cacna1aP97445 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cacna1aP97445 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cacna1aP97445 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cacna1aP97445 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cacna1aP97445 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cacna1aP97445 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cacna1aP97445 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.65■□□□□ 0.58
Cacna1aP97445 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
Cacna1aP97445 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cacna1aP97445 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cacna1aP97445 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cacna1aP97445 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cacna1aP97445 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cacna1aP97445 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cacna1aP97445 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms