Protein–RNA interactions for Protein: P06320

T-cell receptor beta chain V region CTL-F3, mousemouse

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06320 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
P06320 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
P06320 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
P06320 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
P06320 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
P06320 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
P06320 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
P06320 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
P06320 Gm5913-201ENSMUST00000119397 1399 ntBASIC12.75□□□□□ -0.37
P06320 Gm5987-201ENSMUST00000196433 1151 ntBASIC12.75□□□□□ -0.37
P06320 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
P06320 AC117769.4-201ENSMUST00000225679 685 ntBASIC12.75□□□□□ -0.37
P06320 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
P06320 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
P06320 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
P06320 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
P06320 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
P06320 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
P06320 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
P06320 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
P06320 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
P06320 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
P06320 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
P06320 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
P06320 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
P06320 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
P06320 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
P06320 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
P06320 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
P06320 Gm8503-201ENSMUST00000118131 455 ntBASIC12.74□□□□□ -0.37
P06320 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
P06320 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC12.74□□□□□ -0.37
P06320 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
P06320 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
P06320 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
P06320 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
P06320 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
P06320 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
P06320 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
P06320 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
P06320 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
P06320 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
P06320 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC12.73□□□□□ -0.37
P06320 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC12.73□□□□□ -0.37
P06320 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC12.73□□□□□ -0.37
P06320 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC12.73□□□□□ -0.37
P06320 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
P06320 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
P06320 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC12.73□□□□□ -0.37
P06320 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
P06320 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
P06320 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
P06320 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
P06320 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
P06320 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
P06320 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
P06320 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
P06320 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
P06320 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
P06320 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
P06320 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
P06320 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
P06320 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
P06320 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
P06320 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
P06320 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
P06320 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC12.72□□□□□ -0.37
P06320 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
P06320 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
P06320 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
P06320 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
P06320 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
P06320 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
P06320 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
P06320 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
P06320 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
P06320 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
P06320 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
P06320 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC12.71□□□□□ -0.37
P06320 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
P06320 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
P06320 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
P06320 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
P06320 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
P06320 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
P06320 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC12.71□□□□□ -0.38
P06320 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
P06320 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
P06320 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
P06320 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
P06320 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
P06320 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
P06320 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
P06320 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
P06320 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
P06320 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC12.7□□□□□ -0.38
P06320 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
P06320 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
P06320 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
P06320 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 126 ms