Protein–RNA interactions for Protein: O88623

Usp2, Ubiquitin carboxyl-terminal hydrolase 2, mousemouse

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp2O88623 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usp2O88623 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usp2O88623 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC20.67■□□□□ 0.9
Usp2O88623 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usp2O88623 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usp2O88623 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Usp2O88623 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Usp2O88623 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.66■□□□□ 0.9
Usp2O88623 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Usp2O88623 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Usp2O88623 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Usp2O88623 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Usp2O88623 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Usp2O88623 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Usp2O88623 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Usp2O88623 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Usp2O88623 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Usp2O88623 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Usp2O88623 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Usp2O88623 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Usp2O88623 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.65■□□□□ 0.9
Usp2O88623 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
Usp2O88623 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.64■□□□□ 0.89
Usp2O88623 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.64■□□□□ 0.89
Usp2O88623 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.64■□□□□ 0.89
Usp2O88623 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Usp2O88623 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Usp2O88623 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Usp2O88623 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Usp2O88623 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Usp2O88623 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Usp2O88623 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Usp2O88623 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.63■□□□□ 0.89
Usp2O88623 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Usp2O88623 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Usp2O88623 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Usp2O88623 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Usp2O88623 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Usp2O88623 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp2O88623 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp2O88623 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Usp2O88623 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp2O88623 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp2O88623 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp2O88623 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.62■□□□□ 0.89
Usp2O88623 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp2O88623 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp2O88623 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Usp2O88623 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.61■□□□□ 0.89
Usp2O88623 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Usp2O88623 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Usp2O88623 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Usp2O88623 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Usp2O88623 Gm8493-201ENSMUST00000196881 489 ntBASIC20.61■□□□□ 0.89
Usp2O88623 Gm43017-201ENSMUST00000198296 752 ntBASIC20.61■□□□□ 0.89
Usp2O88623 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Usp2O88623 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Usp2O88623 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Usp2O88623 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Usp2O88623 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Usp2O88623 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Usp2O88623 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Usp2O88623 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Usp2O88623 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Usp2O88623 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Usp2O88623 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Usp2O88623 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Usp2O88623 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Usp2O88623 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
Usp2O88623 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Usp2O88623 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Usp2O88623 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Usp2O88623 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Usp2O88623 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Usp2O88623 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.59■□□□□ 0.89
Usp2O88623 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.59■□□□□ 0.89
Usp2O88623 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Usp2O88623 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.59■□□□□ 0.89
Usp2O88623 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Usp2O88623 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.59■□□□□ 0.89
Usp2O88623 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Usp2O88623 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Usp2O88623 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Usp2O88623 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.59■□□□□ 0.89
Usp2O88623 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Usp2O88623 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
Usp2O88623 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.58■□□□□ 0.89
Usp2O88623 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Usp2O88623 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Usp2O88623 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Usp2O88623 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.58■□□□□ 0.89
Usp2O88623 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Usp2O88623 Gm43173-201ENSMUST00000202246 593 ntBASIC20.58■□□□□ 0.89
Usp2O88623 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Usp2O88623 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Usp2O88623 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Usp2O88623 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Usp2O88623 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Usp2O88623 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Usp2O88623 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 178 ms