Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Ttc3O88196 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ttc3O88196 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Ttc3O88196 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC21.49■■□□□ 1.03
Ttc3O88196 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ttc3O88196 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.49■■□□□ 1.03
Ttc3O88196 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ttc3O88196 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC21.48■■□□□ 1.03
Ttc3O88196 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC21.48■■□□□ 1.03
Ttc3O88196 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC21.48■■□□□ 1.03
Ttc3O88196 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ttc3O88196 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Ttc3O88196 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ttc3O88196 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ttc3O88196 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ttc3O88196 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
Ttc3O88196 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ttc3O88196 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Ttc3O88196 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC21.48■■□□□ 1.03
Ttc3O88196 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC21.48■■□□□ 1.03
Ttc3O88196 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Ttc3O88196 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Ttc3O88196 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ttc3O88196 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Ttc3O88196 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Ttc3O88196 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ttc3O88196 Gm10209-201ENSMUST00000203397 1607 ntBASIC21.47■■□□□ 1.03
Ttc3O88196 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ttc3O88196 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ttc3O88196 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Ttc3O88196 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ttc3O88196 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ttc3O88196 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ttc3O88196 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC21.46■■□□□ 1.03
Ttc3O88196 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC21.46■■□□□ 1.03
Ttc3O88196 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Ttc3O88196 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Ttc3O88196 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Ttc3O88196 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
Ttc3O88196 Smad6-203ENSMUST00000179458 273 ntBASIC21.45■■□□□ 1.02
Ttc3O88196 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ttc3O88196 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ttc3O88196 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ttc3O88196 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ttc3O88196 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Ttc3O88196 Gm40848-201ENSMUST00000221998 324 ntBASIC21.44■■□□□ 1.02
Ttc3O88196 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ttc3O88196 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ttc3O88196 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ttc3O88196 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Ttc3O88196 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Ttc3O88196 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Ttc3O88196 Cdc34b-202ENSMUST00000188741 1252 ntBASIC21.42■■□□□ 1.02
Ttc3O88196 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ttc3O88196 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Ttc3O88196 Gm10493-201ENSMUST00000097270 612 ntBASIC21.42■■□□□ 1.02
Ttc3O88196 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ttc3O88196 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ttc3O88196 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
Ttc3O88196 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC21.41■■□□□ 1.02
Ttc3O88196 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ttc3O88196 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ttc3O88196 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ttc3O88196 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Ttc3O88196 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ttc3O88196 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Ttc3O88196 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ttc3O88196 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Ttc3O88196 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC21.4■■□□□ 1.02
Ttc3O88196 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ttc3O88196 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ttc3O88196 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ttc3O88196 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ttc3O88196 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ttc3O88196 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Ttc3O88196 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ttc3O88196 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Ttc3O88196 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
Ttc3O88196 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Ttc3O88196 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ttc3O88196 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ttc3O88196 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC21.38■■□□□ 1.01
Ttc3O88196 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC21.38■■□□□ 1.01
Ttc3O88196 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC21.38■■□□□ 1.01
Ttc3O88196 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ttc3O88196 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.37■■□□□ 1.01
Ttc3O88196 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ttc3O88196 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Ttc3O88196 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ttc3O88196 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ttc3O88196 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ttc3O88196 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Ttc3O88196 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ttc3O88196 AC122428.2-201ENSMUST00000216321 1832 ntBASIC21.36■■□□□ 1.01
Ttc3O88196 Gm10129-202ENSMUST00000193100 1316 ntBASIC21.36■■□□□ 1.01
Ttc3O88196 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ttc3O88196 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Ttc3O88196 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ttc3O88196 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ttc3O88196 Gm5874-201ENSMUST00000096101 508 ntBASIC21.36■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms