Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
BckdkO55028 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BckdkO55028 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
BckdkO55028 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
BckdkO55028 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BckdkO55028 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
BckdkO55028 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BckdkO55028 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.66■□□□□ 0.58
BckdkO55028 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.66■□□□□ 0.58
BckdkO55028 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
BckdkO55028 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BckdkO55028 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BckdkO55028 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
BckdkO55028 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BckdkO55028 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
BckdkO55028 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
BckdkO55028 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.65■□□□□ 0.58
BckdkO55028 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
BckdkO55028 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
BckdkO55028 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
BckdkO55028 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
BckdkO55028 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
BckdkO55028 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
BckdkO55028 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.65■□□□□ 0.58
BckdkO55028 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.65■□□□□ 0.58
BckdkO55028 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
BckdkO55028 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.64■□□□□ 0.57
BckdkO55028 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.64■□□□□ 0.57
BckdkO55028 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC18.64■□□□□ 0.57
BckdkO55028 Golgb1-201ENSMUST00000023534 498 ntBASIC18.64■□□□□ 0.57
BckdkO55028 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BckdkO55028 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.64■□□□□ 0.57
BckdkO55028 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
BckdkO55028 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
BckdkO55028 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.63■□□□□ 0.57
BckdkO55028 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.63■□□□□ 0.57
BckdkO55028 Gm12821-201ENSMUST00000120022 600 ntBASIC18.63■□□□□ 0.57
BckdkO55028 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.63■□□□□ 0.57
BckdkO55028 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.63■□□□□ 0.57
BckdkO55028 Appbp2os-202ENSMUST00000206972 447 ntBASIC18.63■□□□□ 0.57
BckdkO55028 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC18.63■□□□□ 0.57
BckdkO55028 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
BckdkO55028 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BckdkO55028 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
BckdkO55028 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.63■□□□□ 0.57
BckdkO55028 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
BckdkO55028 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.63■□□□□ 0.57
BckdkO55028 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BckdkO55028 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BckdkO55028 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.62■□□□□ 0.57
BckdkO55028 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
BckdkO55028 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BckdkO55028 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
BckdkO55028 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.62■□□□□ 0.57
BckdkO55028 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
BckdkO55028 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BckdkO55028 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BckdkO55028 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BckdkO55028 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
BckdkO55028 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
BckdkO55028 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BckdkO55028 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BckdkO55028 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.61■□□□□ 0.57
BckdkO55028 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
BckdkO55028 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BckdkO55028 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.61■□□□□ 0.57
BckdkO55028 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BckdkO55028 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BckdkO55028 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.61■□□□□ 0.57
BckdkO55028 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
BckdkO55028 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BckdkO55028 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
BckdkO55028 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BckdkO55028 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BckdkO55028 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.6■□□□□ 0.57
BckdkO55028 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
BckdkO55028 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
BckdkO55028 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
BckdkO55028 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.59■□□□□ 0.57
BckdkO55028 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
BckdkO55028 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
BckdkO55028 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.59■□□□□ 0.57
BckdkO55028 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
BckdkO55028 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
BckdkO55028 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
BckdkO55028 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
BckdkO55028 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
BckdkO55028 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
BckdkO55028 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
BckdkO55028 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
BckdkO55028 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.58■□□□□ 0.56
BckdkO55028 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
BckdkO55028 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
BckdkO55028 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.57■□□□□ 0.56
BckdkO55028 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
BckdkO55028 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
BckdkO55028 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.57■□□□□ 0.56
BckdkO55028 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
BckdkO55028 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
BckdkO55028 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms