Protein–RNA interactions for Protein: O35451

Atf6b, Cyclic AMP-dependent transcription factor ATF-6 beta, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6bO35451 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
Atf6bO35451 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC17.45■□□□□ 0.38
Atf6bO35451 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Atf6bO35451 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Atf6bO35451 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC17.45■□□□□ 0.38
Atf6bO35451 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Atf6bO35451 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Atf6bO35451 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Atf6bO35451 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Atf6bO35451 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Atf6bO35451 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Atf6bO35451 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Atf6bO35451 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Atf6bO35451 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Atf6bO35451 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Atf6bO35451 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Atf6bO35451 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Atf6bO35451 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC17.44■□□□□ 0.38
Atf6bO35451 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Atf6bO35451 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
Atf6bO35451 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Atf6bO35451 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Atf6bO35451 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.43■□□□□ 0.38
Atf6bO35451 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC17.43■□□□□ 0.38
Atf6bO35451 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC17.43■□□□□ 0.38
Atf6bO35451 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Atf6bO35451 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Atf6bO35451 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Atf6bO35451 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Atf6bO35451 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Atf6bO35451 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Atf6bO35451 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Atf6bO35451 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Atf6bO35451 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Atf6bO35451 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Atf6bO35451 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Atf6bO35451 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Atf6bO35451 Gm44949-201ENSMUST00000206423 1450 ntBASIC17.42■□□□□ 0.38
Atf6bO35451 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Atf6bO35451 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Atf6bO35451 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Atf6bO35451 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Atf6bO35451 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Atf6bO35451 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Atf6bO35451 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC17.41■□□□□ 0.38
Atf6bO35451 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Atf6bO35451 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Atf6bO35451 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Atf6bO35451 Gm5913-201ENSMUST00000119397 1399 ntBASIC17.4■□□□□ 0.38
Atf6bO35451 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Atf6bO35451 Gm43006-201ENSMUST00000197702 1602 ntBASIC17.4■□□□□ 0.38
Atf6bO35451 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Atf6bO35451 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Atf6bO35451 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC17.4■□□□□ 0.38
Atf6bO35451 Gm9870-201ENSMUST00000063874 645 ntBASIC17.4■□□□□ 0.38
Atf6bO35451 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Atf6bO35451 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Atf6bO35451 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Atf6bO35451 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Atf6bO35451 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Atf6bO35451 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Atf6bO35451 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Atf6bO35451 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC17.39■□□□□ 0.37
Atf6bO35451 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Atf6bO35451 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Atf6bO35451 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Atf6bO35451 Gm12922-201ENSMUST00000120626 809 ntBASIC17.38■□□□□ 0.37
Atf6bO35451 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Atf6bO35451 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Atf6bO35451 Gm7143-201ENSMUST00000222811 859 ntBASIC17.38■□□□□ 0.37
Atf6bO35451 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Atf6bO35451 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Atf6bO35451 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
Atf6bO35451 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Atf6bO35451 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Atf6bO35451 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Atf6bO35451 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Atf6bO35451 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Atf6bO35451 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Atf6bO35451 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Atf6bO35451 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Atf6bO35451 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC17.37■□□□□ 0.37
Atf6bO35451 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Atf6bO35451 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC17.37■□□□□ 0.37
Atf6bO35451 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Atf6bO35451 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atf6bO35451 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atf6bO35451 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atf6bO35451 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atf6bO35451 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC17.36■□□□□ 0.37
Atf6bO35451 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Atf6bO35451 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC17.36■□□□□ 0.37
Atf6bO35451 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Atf6bO35451 Gm9847-201ENSMUST00000052528 599 ntBASIC17.36■□□□□ 0.37
Atf6bO35451 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Atf6bO35451 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atf6bO35451 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atf6bO35451 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC17.36■□□□□ 0.37
Atf6bO35451 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Atf6bO35451 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms