Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hps1O08983 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.56■□□□□ 0.56
Hps1O08983 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hps1O08983 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Hps1O08983 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hps1O08983 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Hps1O08983 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Hps1O08983 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.56■□□□□ 0.56
Hps1O08983 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Hps1O08983 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hps1O08983 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.56■□□□□ 0.56
Hps1O08983 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Hps1O08983 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.56■□□□□ 0.56
Hps1O08983 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hps1O08983 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hps1O08983 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.55■□□□□ 0.56
Hps1O08983 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hps1O08983 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hps1O08983 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.55■□□□□ 0.56
Hps1O08983 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.55■□□□□ 0.56
Hps1O08983 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Hps1O08983 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hps1O08983 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Hps1O08983 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hps1O08983 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hps1O08983 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hps1O08983 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hps1O08983 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hps1O08983 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Hps1O08983 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Hps1O08983 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
Hps1O08983 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hps1O08983 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC18.55■□□□□ 0.56
Hps1O08983 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hps1O08983 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hps1O08983 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
Hps1O08983 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hps1O08983 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hps1O08983 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.54■□□□□ 0.56
Hps1O08983 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Hps1O08983 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Hps1O08983 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hps1O08983 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hps1O08983 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hps1O08983 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hps1O08983 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.54■□□□□ 0.56
Hps1O08983 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Hps1O08983 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Hps1O08983 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hps1O08983 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hps1O08983 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.53■□□□□ 0.56
Hps1O08983 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Hps1O08983 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hps1O08983 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hps1O08983 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hps1O08983 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Hps1O08983 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hps1O08983 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Hps1O08983 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hps1O08983 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hps1O08983 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hps1O08983 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.52■□□□□ 0.56
Hps1O08983 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hps1O08983 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Hps1O08983 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Hps1O08983 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Hps1O08983 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Hps1O08983 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Hps1O08983 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Hps1O08983 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.52■□□□□ 0.55
Hps1O08983 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hps1O08983 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hps1O08983 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hps1O08983 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Hps1O08983 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.51■□□□□ 0.55
Hps1O08983 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC18.51■□□□□ 0.55
Hps1O08983 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Hps1O08983 Nsd1-206ENSMUST00000224918 1001 ntBASIC18.51■□□□□ 0.55
Hps1O08983 Gm13241-201ENSMUST00000094493 780 ntBASIC18.51■□□□□ 0.55
Hps1O08983 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hps1O08983 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hps1O08983 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
Hps1O08983 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Hps1O08983 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hps1O08983 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Hps1O08983 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Hps1O08983 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Hps1O08983 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hps1O08983 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hps1O08983 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hps1O08983 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Hps1O08983 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Hps1O08983 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hps1O08983 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
Hps1O08983 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hps1O08983 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hps1O08983 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hps1O08983 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Hps1O08983 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Hps1O08983 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms