Protein–RNA interactions for Protein: E9PUB3

Gm5878, Predicted gene 5878, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5878E9PUB3 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm5878E9PUB3 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gm5878E9PUB3 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gm5878E9PUB3 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gm5878E9PUB3 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gm5878E9PUB3 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gm5878E9PUB3 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gm5878E9PUB3 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Gm5878E9PUB3 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gm5878E9PUB3 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Gm5878E9PUB3 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Gm5878E9PUB3 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Gm5878E9PUB3 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC15.2■□□□□ 0.02
Gm5878E9PUB3 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Gm5878E9PUB3 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC15.2■□□□□ 0.02
Gm5878E9PUB3 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Gm5878E9PUB3 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm5878E9PUB3 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm5878E9PUB3 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Gm5878E9PUB3 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC15.2■□□□□ 0.02
Gm5878E9PUB3 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm5878E9PUB3 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm5878E9PUB3 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm5878E9PUB3 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm5878E9PUB3 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Gm5878E9PUB3 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm5878E9PUB3 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Gm5878E9PUB3 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm5878E9PUB3 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Gm5878E9PUB3 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm5878E9PUB3 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Gm5878E9PUB3 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC15.19■□□□□ 0.02
Gm5878E9PUB3 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Gm5878E9PUB3 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Gm5878E9PUB3 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC15.18■□□□□ 0.02
Gm5878E9PUB3 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Gm5878E9PUB3 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm5878E9PUB3 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm5878E9PUB3 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm5878E9PUB3 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm5878E9PUB3 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm5878E9PUB3 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm5878E9PUB3 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC15.17■□□□□ 0.02
Gm5878E9PUB3 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm5878E9PUB3 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm5878E9PUB3 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Gm5878E9PUB3 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm5878E9PUB3 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm5878E9PUB3 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm5878E9PUB3 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC15.17■□□□□ 0.02
Gm5878E9PUB3 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Gm5878E9PUB3 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm5878E9PUB3 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm5878E9PUB3 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm5878E9PUB3 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm5878E9PUB3 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm5878E9PUB3 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Gm5878E9PUB3 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm5878E9PUB3 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Gm5878E9PUB3 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm5878E9PUB3 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm5878E9PUB3 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm5878E9PUB3 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Gm5878E9PUB3 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Gm5878E9PUB3 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm5878E9PUB3 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Gm5878E9PUB3 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm5878E9PUB3 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC15.15■□□□□ 0.02
Gm5878E9PUB3 Gm40881-201ENSMUST00000223397 166 ntBASIC15.15■□□□□ 0.02
Gm5878E9PUB3 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Gm5878E9PUB3 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm5878E9PUB3 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm5878E9PUB3 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm5878E9PUB3 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm5878E9PUB3 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Gm5878E9PUB3 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Gm5878E9PUB3 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm5878E9PUB3 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Gm5878E9PUB3 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Gm5878E9PUB3 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm5878E9PUB3 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Gm5878E9PUB3 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm5878E9PUB3 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm5878E9PUB3 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm5878E9PUB3 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Gm5878E9PUB3 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Gm5878E9PUB3 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Gm5878E9PUB3 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm5878E9PUB3 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Gm5878E9PUB3 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Gm5878E9PUB3 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Gm5878E9PUB3 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
Gm5878E9PUB3 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm5878E9PUB3 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm5878E9PUB3 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm5878E9PUB3 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC15.13■□□□□ 0.01
Gm5878E9PUB3 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC15.13■□□□□ 0.01
Gm5878E9PUB3 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm5878E9PUB3 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Gm5878E9PUB3 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms