Protein–RNA interactions for Protein: A0A0G2JF93

Trav13n-2, T cell receptor alpha variable 13D-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-2A0A0G2JF93 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13n-2A0A0G2JF93 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13n-2A0A0G2JF93 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13n-2A0A0G2JF93 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13n-2A0A0G2JF93 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13n-2A0A0G2JF93 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13n-2A0A0G2JF93 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13n-2A0A0G2JF93 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13n-2A0A0G2JF93 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13n-2A0A0G2JF93 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13n-2A0A0G2JF93 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13n-2A0A0G2JF93 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trav13n-2A0A0G2JF93 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC13.34□□□□□ -0.27
Trav13n-2A0A0G2JF93 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13n-2A0A0G2JF93 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trav13n-2A0A0G2JF93 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13n-2A0A0G2JF93 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC13.34□□□□□ -0.27
Trav13n-2A0A0G2JF93 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13n-2A0A0G2JF93 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13n-2A0A0G2JF93 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13n-2A0A0G2JF93 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC13.34□□□□□ -0.27
Trav13n-2A0A0G2JF93 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trav13n-2A0A0G2JF93 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13n-2A0A0G2JF93 AC152827.1-201ENSMUST00000221143 2189 ntBASIC13.34□□□□□ -0.27
Trav13n-2A0A0G2JF93 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13n-2A0A0G2JF93 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13n-2A0A0G2JF93 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13n-2A0A0G2JF93 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13n-2A0A0G2JF93 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13n-2A0A0G2JF93 Gm8503-201ENSMUST00000118131 455 ntBASIC13.33□□□□□ -0.28
Trav13n-2A0A0G2JF93 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC13.33□□□□□ -0.28
Trav13n-2A0A0G2JF93 Gm5987-201ENSMUST00000196433 1151 ntBASIC13.33□□□□□ -0.28
Trav13n-2A0A0G2JF93 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC13.33□□□□□ -0.28
Trav13n-2A0A0G2JF93 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13n-2A0A0G2JF93 Gm5112-201ENSMUST00000204407 2368 ntBASIC13.33□□□□□ -0.28
Trav13n-2A0A0G2JF93 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13n-2A0A0G2JF93 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13n-2A0A0G2JF93 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13n-2A0A0G2JF93 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13n-2A0A0G2JF93 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13n-2A0A0G2JF93 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13n-2A0A0G2JF93 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13n-2A0A0G2JF93 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13n-2A0A0G2JF93 Gm5913-201ENSMUST00000119397 1399 ntBASIC13.32□□□□□ -0.28
Trav13n-2A0A0G2JF93 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
Trav13n-2A0A0G2JF93 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13n-2A0A0G2JF93 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13n-2A0A0G2JF93 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13n-2A0A0G2JF93 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trav13n-2A0A0G2JF93 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13n-2A0A0G2JF93 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13n-2A0A0G2JF93 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13n-2A0A0G2JF93 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13n-2A0A0G2JF93 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13n-2A0A0G2JF93 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13n-2A0A0G2JF93 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13n-2A0A0G2JF93 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13n-2A0A0G2JF93 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13n-2A0A0G2JF93 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trav13n-2A0A0G2JF93 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13n-2A0A0G2JF93 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13n-2A0A0G2JF93 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trav13n-2A0A0G2JF93 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13n-2A0A0G2JF93 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC13.31□□□□□ -0.28
Trav13n-2A0A0G2JF93 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13n-2A0A0G2JF93 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13n-2A0A0G2JF93 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13n-2A0A0G2JF93 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13n-2A0A0G2JF93 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trav13n-2A0A0G2JF93 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC13.31□□□□□ -0.28
Trav13n-2A0A0G2JF93 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trav13n-2A0A0G2JF93 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13n-2A0A0G2JF93 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC13.31□□□□□ -0.28
Trav13n-2A0A0G2JF93 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13n-2A0A0G2JF93 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13n-2A0A0G2JF93 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13n-2A0A0G2JF93 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13n-2A0A0G2JF93 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13n-2A0A0G2JF93 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13n-2A0A0G2JF93 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13n-2A0A0G2JF93 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13n-2A0A0G2JF93 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC13.3□□□□□ -0.28
Trav13n-2A0A0G2JF93 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13n-2A0A0G2JF93 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13n-2A0A0G2JF93 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13n-2A0A0G2JF93 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Trav13n-2A0A0G2JF93 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13n-2A0A0G2JF93 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13n-2A0A0G2JF93 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13n-2A0A0G2JF93 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13n-2A0A0G2JF93 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13n-2A0A0G2JF93 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13n-2A0A0G2JF93 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13n-2A0A0G2JF93 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13n-2A0A0G2JF93 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13n-2A0A0G2JF93 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
Trav13n-2A0A0G2JF93 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC13.29□□□□□ -0.28
Trav13n-2A0A0G2JF93 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13n-2A0A0G2JF93 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC13.29□□□□□ -0.28
Trav13n-2A0A0G2JF93 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms