Protein–RNA interactions for Protein: A0A075B642

Trav10, T cell receptor alpha variable 10 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav10A0A075B642 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav10A0A075B642 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav10A0A075B642 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC17.93■□□□□ 0.46
Trav10A0A075B642 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trav10A0A075B642 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Trav10A0A075B642 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav10A0A075B642 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trav10A0A075B642 Hsf1-207ENSMUST00000228371 2102 ntBASIC17.92■□□□□ 0.46
Trav10A0A075B642 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Trav10A0A075B642 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav10A0A075B642 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav10A0A075B642 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trav10A0A075B642 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trav10A0A075B642 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trav10A0A075B642 Gm7143-201ENSMUST00000222811 859 ntBASIC17.92■□□□□ 0.46
Trav10A0A075B642 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav10A0A075B642 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav10A0A075B642 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav10A0A075B642 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav10A0A075B642 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav10A0A075B642 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav10A0A075B642 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trav10A0A075B642 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trav10A0A075B642 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trav10A0A075B642 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav10A0A075B642 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trav10A0A075B642 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav10A0A075B642 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC17.91■□□□□ 0.46
Trav10A0A075B642 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC17.91■□□□□ 0.46
Trav10A0A075B642 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trav10A0A075B642 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC17.91■□□□□ 0.46
Trav10A0A075B642 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav10A0A075B642 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Trav10A0A075B642 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav10A0A075B642 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Trav10A0A075B642 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav10A0A075B642 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trav10A0A075B642 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC17.9■□□□□ 0.46
Trav10A0A075B642 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC17.9■□□□□ 0.46
Trav10A0A075B642 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Trav10A0A075B642 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC17.9■□□□□ 0.46
Trav10A0A075B642 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.9■□□□□ 0.46
Trav10A0A075B642 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Trav10A0A075B642 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav10A0A075B642 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav10A0A075B642 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
Trav10A0A075B642 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trav10A0A075B642 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Trav10A0A075B642 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav10A0A075B642 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trav10A0A075B642 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
Trav10A0A075B642 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav10A0A075B642 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav10A0A075B642 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trav10A0A075B642 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav10A0A075B642 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav10A0A075B642 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav10A0A075B642 Gm22238-201ENSMUST00000175222 88 ntBASIC17.88■□□□□ 0.45
Trav10A0A075B642 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC17.88■□□□□ 0.45
Trav10A0A075B642 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trav10A0A075B642 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav10A0A075B642 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav10A0A075B642 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav10A0A075B642 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Trav10A0A075B642 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav10A0A075B642 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC17.87■□□□□ 0.45
Trav10A0A075B642 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Trav10A0A075B642 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Trav10A0A075B642 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Trav10A0A075B642 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav10A0A075B642 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav10A0A075B642 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trav10A0A075B642 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trav10A0A075B642 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav10A0A075B642 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav10A0A075B642 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav10A0A075B642 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav10A0A075B642 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav10A0A075B642 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav10A0A075B642 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav10A0A075B642 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav10A0A075B642 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Trav10A0A075B642 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav10A0A075B642 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav10A0A075B642 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav10A0A075B642 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav10A0A075B642 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav10A0A075B642 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC17.85■□□□□ 0.45
Trav10A0A075B642 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Trav10A0A075B642 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC17.85■□□□□ 0.45
Trav10A0A075B642 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav10A0A075B642 Gm9870-201ENSMUST00000063874 645 ntBASIC17.85■□□□□ 0.45
Trav10A0A075B642 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav10A0A075B642 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav10A0A075B642 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC17.84■□□□□ 0.45
Trav10A0A075B642 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC17.84■□□□□ 0.45
Trav10A0A075B642 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav10A0A075B642 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav10A0A075B642 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav10A0A075B642 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms