Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav7n-4A0A075B620 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav7n-4A0A075B620 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav7n-4A0A075B620 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Trav7n-4A0A075B620 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav7n-4A0A075B620 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav7n-4A0A075B620 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav7n-4A0A075B620 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav7n-4A0A075B620 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav7n-4A0A075B620 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav7n-4A0A075B620 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav7n-4A0A075B620 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Trav7n-4A0A075B620 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC15.3■□□□□ 0.04
Trav7n-4A0A075B620 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav7n-4A0A075B620 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Trav7n-4A0A075B620 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav7n-4A0A075B620 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav7n-4A0A075B620 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav7n-4A0A075B620 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav7n-4A0A075B620 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Trav7n-4A0A075B620 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
Trav7n-4A0A075B620 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav7n-4A0A075B620 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav7n-4A0A075B620 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC15.29■□□□□ 0.04
Trav7n-4A0A075B620 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav7n-4A0A075B620 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav7n-4A0A075B620 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav7n-4A0A075B620 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC15.29■□□□□ 0.04
Trav7n-4A0A075B620 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav7n-4A0A075B620 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav7n-4A0A075B620 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav7n-4A0A075B620 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav7n-4A0A075B620 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav7n-4A0A075B620 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav7n-4A0A075B620 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav7n-4A0A075B620 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav7n-4A0A075B620 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC15.28■□□□□ 0.04
Trav7n-4A0A075B620 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav7n-4A0A075B620 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav7n-4A0A075B620 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav7n-4A0A075B620 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav7n-4A0A075B620 AC116713.1-201ENSMUST00000215074 430 ntBASIC15.28■□□□□ 0.04
Trav7n-4A0A075B620 Pkd1-207ENSMUST00000228550 1050 ntBASIC15.28■□□□□ 0.04
Trav7n-4A0A075B620 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav7n-4A0A075B620 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav7n-4A0A075B620 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trav7n-4A0A075B620 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav7n-4A0A075B620 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Trav7n-4A0A075B620 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav7n-4A0A075B620 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Trav7n-4A0A075B620 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Trav7n-4A0A075B620 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Trav7n-4A0A075B620 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav7n-4A0A075B620 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC15.27■□□□□ 0.04
Trav7n-4A0A075B620 Nsd1-206ENSMUST00000224918 1001 ntBASIC15.27■□□□□ 0.04
Trav7n-4A0A075B620 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav7n-4A0A075B620 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trav7n-4A0A075B620 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav7n-4A0A075B620 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Trav7n-4A0A075B620 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav7n-4A0A075B620 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav7n-4A0A075B620 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav7n-4A0A075B620 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav7n-4A0A075B620 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC15.26■□□□□ 0.03
Trav7n-4A0A075B620 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav7n-4A0A075B620 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav7n-4A0A075B620 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC15.26■□□□□ 0.03
Trav7n-4A0A075B620 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav7n-4A0A075B620 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Trav7n-4A0A075B620 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav7n-4A0A075B620 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav7n-4A0A075B620 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC15.25■□□□□ 0.03
Trav7n-4A0A075B620 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav7n-4A0A075B620 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav7n-4A0A075B620 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav7n-4A0A075B620 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav7n-4A0A075B620 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav7n-4A0A075B620 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav7n-4A0A075B620 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav7n-4A0A075B620 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav7n-4A0A075B620 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav7n-4A0A075B620 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav7n-4A0A075B620 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav7n-4A0A075B620 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC15.24■□□□□ 0.03
Trav7n-4A0A075B620 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav7n-4A0A075B620 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav7n-4A0A075B620 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav7n-4A0A075B620 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC15.24■□□□□ 0.03
Trav7n-4A0A075B620 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav7n-4A0A075B620 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC15.23■□□□□ 0.03
Trav7n-4A0A075B620 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC15.23■□□□□ 0.03
Trav7n-4A0A075B620 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC15.23■□□□□ 0.03
Trav7n-4A0A075B620 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Trav7n-4A0A075B620 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC15.23■□□□□ 0.03
Trav7n-4A0A075B620 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Trav7n-4A0A075B620 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav7n-4A0A075B620 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav7n-4A0A075B620 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav7n-4A0A075B620 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC15.22■□□□□ 0.03
Trav7n-4A0A075B620 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms