Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav6-1A0A075B5Z8 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav6-1A0A075B5Z8 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav6-1A0A075B5Z8 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav6-1A0A075B5Z8 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav6-1A0A075B5Z8 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav6-1A0A075B5Z8 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Trav6-1A0A075B5Z8 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trav6-1A0A075B5Z8 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav6-1A0A075B5Z8 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Trav6-1A0A075B5Z8 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC16.26■□□□□ 0.19
Trav6-1A0A075B5Z8 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Trav6-1A0A075B5Z8 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Trav6-1A0A075B5Z8 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav6-1A0A075B5Z8 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav6-1A0A075B5Z8 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav6-1A0A075B5Z8 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Trav6-1A0A075B5Z8 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Trav6-1A0A075B5Z8 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trav6-1A0A075B5Z8 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Trav6-1A0A075B5Z8 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Trav6-1A0A075B5Z8 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav6-1A0A075B5Z8 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav6-1A0A075B5Z8 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav6-1A0A075B5Z8 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Trav6-1A0A075B5Z8 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav6-1A0A075B5Z8 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav6-1A0A075B5Z8 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav6-1A0A075B5Z8 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Trav6-1A0A075B5Z8 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC16.24■□□□□ 0.19
Trav6-1A0A075B5Z8 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Trav6-1A0A075B5Z8 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Trav6-1A0A075B5Z8 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC16.24■□□□□ 0.19
Trav6-1A0A075B5Z8 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC16.24■□□□□ 0.19
Trav6-1A0A075B5Z8 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav6-1A0A075B5Z8 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav6-1A0A075B5Z8 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trav6-1A0A075B5Z8 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav6-1A0A075B5Z8 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav6-1A0A075B5Z8 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC16.23■□□□□ 0.19
Trav6-1A0A075B5Z8 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC16.23■□□□□ 0.19
Trav6-1A0A075B5Z8 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav6-1A0A075B5Z8 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav6-1A0A075B5Z8 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav6-1A0A075B5Z8 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav6-1A0A075B5Z8 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav6-1A0A075B5Z8 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav6-1A0A075B5Z8 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav6-1A0A075B5Z8 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav6-1A0A075B5Z8 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav6-1A0A075B5Z8 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav6-1A0A075B5Z8 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trav6-1A0A075B5Z8 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Trav6-1A0A075B5Z8 Gm11175-201ENSMUST00000116172 543 ntBASIC16.22■□□□□ 0.19
Trav6-1A0A075B5Z8 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Trav6-1A0A075B5Z8 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trav6-1A0A075B5Z8 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav6-1A0A075B5Z8 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trav6-1A0A075B5Z8 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav6-1A0A075B5Z8 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav6-1A0A075B5Z8 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav6-1A0A075B5Z8 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav6-1A0A075B5Z8 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trav6-1A0A075B5Z8 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC16.21■□□□□ 0.19
Trav6-1A0A075B5Z8 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trav6-1A0A075B5Z8 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Trav6-1A0A075B5Z8 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trav6-1A0A075B5Z8 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Trav6-1A0A075B5Z8 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC16.21■□□□□ 0.19
Trav6-1A0A075B5Z8 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav6-1A0A075B5Z8 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trav6-1A0A075B5Z8 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Trav6-1A0A075B5Z8 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav6-1A0A075B5Z8 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav6-1A0A075B5Z8 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav6-1A0A075B5Z8 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trav6-1A0A075B5Z8 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav6-1A0A075B5Z8 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Trav6-1A0A075B5Z8 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trav6-1A0A075B5Z8 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC16.2■□□□□ 0.18
Trav6-1A0A075B5Z8 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trav6-1A0A075B5Z8 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav6-1A0A075B5Z8 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC16.2■□□□□ 0.18
Trav6-1A0A075B5Z8 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trav6-1A0A075B5Z8 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Trav6-1A0A075B5Z8 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Trav6-1A0A075B5Z8 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6-1A0A075B5Z8 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Trav6-1A0A075B5Z8 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6-1A0A075B5Z8 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC16.19■□□□□ 0.18
Trav6-1A0A075B5Z8 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6-1A0A075B5Z8 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6-1A0A075B5Z8 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6-1A0A075B5Z8 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6-1A0A075B5Z8 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC16.19■□□□□ 0.18
Trav6-1A0A075B5Z8 Gm12366-201ENSMUST00000121722 873 ntBASIC16.19■□□□□ 0.18
Trav6-1A0A075B5Z8 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC16.19■□□□□ 0.18
Trav6-1A0A075B5Z8 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6-1A0A075B5Z8 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6-1A0A075B5Z8 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 255.7 ms