Protein–RNA interactions for Protein: W4VSP6

Gm5538, MCG67716, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5538W4VSP6 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gm5538W4VSP6 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Gm5538W4VSP6 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gm5538W4VSP6 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Gm5538W4VSP6 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.8■□□□□ 0.92
Gm5538W4VSP6 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Gm5538W4VSP6 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.8■□□□□ 0.92
Gm5538W4VSP6 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Gm5538W4VSP6 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gm5538W4VSP6 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gm5538W4VSP6 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Gm5538W4VSP6 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gm5538W4VSP6 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gm5538W4VSP6 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gm5538W4VSP6 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gm5538W4VSP6 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gm5538W4VSP6 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Gm5538W4VSP6 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Gm5538W4VSP6 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gm5538W4VSP6 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Gm5538W4VSP6 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.78■□□□□ 0.92
Gm5538W4VSP6 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.78■□□□□ 0.92
Gm5538W4VSP6 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Gm5538W4VSP6 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gm5538W4VSP6 Gm9870-201ENSMUST00000063874 645 ntBASIC20.78■□□□□ 0.92
Gm5538W4VSP6 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gm5538W4VSP6 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gm5538W4VSP6 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
Gm5538W4VSP6 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Gm5538W4VSP6 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Gm5538W4VSP6 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Gm5538W4VSP6 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Gm5538W4VSP6 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.77■□□□□ 0.92
Gm5538W4VSP6 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.77■□□□□ 0.92
Gm5538W4VSP6 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Gm5538W4VSP6 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Gm5538W4VSP6 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Gm5538W4VSP6 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Gm5538W4VSP6 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Gm5538W4VSP6 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gm5538W4VSP6 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gm5538W4VSP6 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gm5538W4VSP6 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gm5538W4VSP6 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.75■□□□□ 0.91
Gm5538W4VSP6 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gm5538W4VSP6 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Gm5538W4VSP6 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gm5538W4VSP6 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Gm5538W4VSP6 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gm5538W4VSP6 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Gm5538W4VSP6 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gm5538W4VSP6 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gm5538W4VSP6 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.74■□□□□ 0.91
Gm5538W4VSP6 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gm5538W4VSP6 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
Gm5538W4VSP6 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gm5538W4VSP6 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gm5538W4VSP6 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gm5538W4VSP6 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Gm5538W4VSP6 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gm5538W4VSP6 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Gm5538W4VSP6 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.73■□□□□ 0.91
Gm5538W4VSP6 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.73■□□□□ 0.91
Gm5538W4VSP6 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.73■□□□□ 0.91
Gm5538W4VSP6 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gm5538W4VSP6 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.73■□□□□ 0.91
Gm5538W4VSP6 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Gm5538W4VSP6 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
Gm5538W4VSP6 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gm5538W4VSP6 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.73■□□□□ 0.91
Gm5538W4VSP6 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Gm5538W4VSP6 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gm5538W4VSP6 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gm5538W4VSP6 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gm5538W4VSP6 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Gm5538W4VSP6 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.72■□□□□ 0.91
Gm5538W4VSP6 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gm5538W4VSP6 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Gm5538W4VSP6 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gm5538W4VSP6 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gm5538W4VSP6 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gm5538W4VSP6 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Gm5538W4VSP6 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gm5538W4VSP6 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gm5538W4VSP6 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
Gm5538W4VSP6 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Gm5538W4VSP6 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gm5538W4VSP6 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Gm5538W4VSP6 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Gm5538W4VSP6 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.71■□□□□ 0.91
Gm5538W4VSP6 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gm5538W4VSP6 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gm5538W4VSP6 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gm5538W4VSP6 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Gm5538W4VSP6 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gm5538W4VSP6 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.7■□□□□ 0.9
Gm5538W4VSP6 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Gm5538W4VSP6 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Gm5538W4VSP6 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gm5538W4VSP6 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms