Protein–RNA interactions for Protein: Q9Z0S4

Cldn13, Claudin-13, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn13Q9Z0S4 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cldn13Q9Z0S4 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.1■□□□□ 0.49
Cldn13Q9Z0S4 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Cldn13Q9Z0S4 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cldn13Q9Z0S4 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Cldn13Q9Z0S4 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Cldn13Q9Z0S4 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cldn13Q9Z0S4 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cldn13Q9Z0S4 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cldn13Q9Z0S4 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cldn13Q9Z0S4 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cldn13Q9Z0S4 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cldn13Q9Z0S4 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cldn13Q9Z0S4 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cldn13Q9Z0S4 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cldn13Q9Z0S4 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cldn13Q9Z0S4 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cldn13Q9Z0S4 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.09■□□□□ 0.49
Cldn13Q9Z0S4 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.09■□□□□ 0.49
Cldn13Q9Z0S4 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cldn13Q9Z0S4 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cldn13Q9Z0S4 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cldn13Q9Z0S4 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cldn13Q9Z0S4 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.09■□□□□ 0.49
Cldn13Q9Z0S4 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cldn13Q9Z0S4 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cldn13Q9Z0S4 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cldn13Q9Z0S4 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.08■□□□□ 0.49
Cldn13Q9Z0S4 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Cldn13Q9Z0S4 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.08■□□□□ 0.48
Cldn13Q9Z0S4 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cldn13Q9Z0S4 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cldn13Q9Z0S4 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cldn13Q9Z0S4 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Cldn13Q9Z0S4 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Cldn13Q9Z0S4 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cldn13Q9Z0S4 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cldn13Q9Z0S4 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cldn13Q9Z0S4 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cldn13Q9Z0S4 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cldn13Q9Z0S4 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cldn13Q9Z0S4 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cldn13Q9Z0S4 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cldn13Q9Z0S4 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.07■□□□□ 0.48
Cldn13Q9Z0S4 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cldn13Q9Z0S4 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cldn13Q9Z0S4 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cldn13Q9Z0S4 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cldn13Q9Z0S4 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cldn13Q9Z0S4 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cldn13Q9Z0S4 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cldn13Q9Z0S4 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cldn13Q9Z0S4 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cldn13Q9Z0S4 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cldn13Q9Z0S4 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cldn13Q9Z0S4 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cldn13Q9Z0S4 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cldn13Q9Z0S4 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cldn13Q9Z0S4 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cldn13Q9Z0S4 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Cldn13Q9Z0S4 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cldn13Q9Z0S4 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cldn13Q9Z0S4 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cldn13Q9Z0S4 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cldn13Q9Z0S4 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cldn13Q9Z0S4 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cldn13Q9Z0S4 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cldn13Q9Z0S4 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cldn13Q9Z0S4 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cldn13Q9Z0S4 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cldn13Q9Z0S4 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cldn13Q9Z0S4 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cldn13Q9Z0S4 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cldn13Q9Z0S4 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cldn13Q9Z0S4 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Cldn13Q9Z0S4 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cldn13Q9Z0S4 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Cldn13Q9Z0S4 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cldn13Q9Z0S4 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cldn13Q9Z0S4 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Cldn13Q9Z0S4 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Cldn13Q9Z0S4 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cldn13Q9Z0S4 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cldn13Q9Z0S4 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cldn13Q9Z0S4 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cldn13Q9Z0S4 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cldn13Q9Z0S4 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cldn13Q9Z0S4 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Cldn13Q9Z0S4 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cldn13Q9Z0S4 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cldn13Q9Z0S4 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cldn13Q9Z0S4 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Cldn13Q9Z0S4 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cldn13Q9Z0S4 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cldn13Q9Z0S4 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cldn13Q9Z0S4 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cldn13Q9Z0S4 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cldn13Q9Z0S4 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Cldn13Q9Z0S4 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cldn13Q9Z0S4 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms