Protein–RNA interactions for Protein: Q9R1R0

Lhx6, LIM/homeobox protein Lhx6, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx6Q9R1R0 Gm27801-201ENSMUST00000184174 223 ntBASIC18.93■□□□□ 0.62
Lhx6Q9R1R0 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.93■□□□□ 0.62
Lhx6Q9R1R0 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lhx6Q9R1R0 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lhx6Q9R1R0 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.93■□□□□ 0.62
Lhx6Q9R1R0 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
Lhx6Q9R1R0 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Lhx6Q9R1R0 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lhx6Q9R1R0 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18.93■□□□□ 0.62
Lhx6Q9R1R0 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lhx6Q9R1R0 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Lhx6Q9R1R0 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lhx6Q9R1R0 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lhx6Q9R1R0 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.92■□□□□ 0.62
Lhx6Q9R1R0 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.92■□□□□ 0.62
Lhx6Q9R1R0 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lhx6Q9R1R0 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lhx6Q9R1R0 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.92■□□□□ 0.62
Lhx6Q9R1R0 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Lhx6Q9R1R0 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Lhx6Q9R1R0 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lhx6Q9R1R0 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lhx6Q9R1R0 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Lhx6Q9R1R0 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lhx6Q9R1R0 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.91■□□□□ 0.62
Lhx6Q9R1R0 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lhx6Q9R1R0 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lhx6Q9R1R0 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.91■□□□□ 0.62
Lhx6Q9R1R0 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.91■□□□□ 0.62
Lhx6Q9R1R0 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.91■□□□□ 0.62
Lhx6Q9R1R0 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Lhx6Q9R1R0 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Lhx6Q9R1R0 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lhx6Q9R1R0 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lhx6Q9R1R0 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lhx6Q9R1R0 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lhx6Q9R1R0 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Lhx6Q9R1R0 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Lhx6Q9R1R0 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Lhx6Q9R1R0 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Lhx6Q9R1R0 Gm10252-201ENSMUST00000209541 832 ntBASIC18.9■□□□□ 0.62
Lhx6Q9R1R0 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lhx6Q9R1R0 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lhx6Q9R1R0 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.9■□□□□ 0.62
Lhx6Q9R1R0 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lhx6Q9R1R0 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lhx6Q9R1R0 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Lhx6Q9R1R0 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lhx6Q9R1R0 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lhx6Q9R1R0 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC18.89■□□□□ 0.61
Lhx6Q9R1R0 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Lhx6Q9R1R0 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lhx6Q9R1R0 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Lhx6Q9R1R0 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lhx6Q9R1R0 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
Lhx6Q9R1R0 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Lhx6Q9R1R0 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lhx6Q9R1R0 AC158538.1-201ENSMUST00000225870 294 ntBASIC18.89■□□□□ 0.61
Lhx6Q9R1R0 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lhx6Q9R1R0 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
Lhx6Q9R1R0 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lhx6Q9R1R0 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.89■□□□□ 0.61
Lhx6Q9R1R0 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lhx6Q9R1R0 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lhx6Q9R1R0 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lhx6Q9R1R0 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Lhx6Q9R1R0 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lhx6Q9R1R0 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.88■□□□□ 0.61
Lhx6Q9R1R0 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lhx6Q9R1R0 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.88■□□□□ 0.61
Lhx6Q9R1R0 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lhx6Q9R1R0 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lhx6Q9R1R0 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.88■□□□□ 0.61
Lhx6Q9R1R0 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Lhx6Q9R1R0 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Lhx6Q9R1R0 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lhx6Q9R1R0 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lhx6Q9R1R0 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Lhx6Q9R1R0 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC18.86■□□□□ 0.61
Lhx6Q9R1R0 Gm7977-201ENSMUST00000193787 748 ntBASIC18.86■□□□□ 0.61
Lhx6Q9R1R0 AV356131-201ENSMUST00000206201 750 ntBASIC18.86■□□□□ 0.61
Lhx6Q9R1R0 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC18.86■□□□□ 0.61
Lhx6Q9R1R0 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lhx6Q9R1R0 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Lhx6Q9R1R0 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Lhx6Q9R1R0 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.85■□□□□ 0.61
Lhx6Q9R1R0 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lhx6Q9R1R0 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Lhx6Q9R1R0 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Lhx6Q9R1R0 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.85■□□□□ 0.61
Lhx6Q9R1R0 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lhx6Q9R1R0 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lhx6Q9R1R0 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.85■□□□□ 0.61
Lhx6Q9R1R0 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Lhx6Q9R1R0 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lhx6Q9R1R0 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Lhx6Q9R1R0 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.84■□□□□ 0.61
Lhx6Q9R1R0 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Lhx6Q9R1R0 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lhx6Q9R1R0 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms