Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC21■□□□□ 0.95
Col4a4Q9QZR9 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Col4a4Q9QZR9 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Col4a4Q9QZR9 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.99■□□□□ 0.95
Col4a4Q9QZR9 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.99■□□□□ 0.95
Col4a4Q9QZR9 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC20.99■□□□□ 0.95
Col4a4Q9QZR9 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col4a4Q9QZR9 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col4a4Q9QZR9 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.99■□□□□ 0.95
Col4a4Q9QZR9 Reep4-203ENSMUST00000226563 1444 ntBASIC20.99■□□□□ 0.95
Col4a4Q9QZR9 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col4a4Q9QZR9 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC20.99■□□□□ 0.95
Col4a4Q9QZR9 Gm10252-201ENSMUST00000209541 832 ntBASIC20.99■□□□□ 0.95
Col4a4Q9QZR9 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
Col4a4Q9QZR9 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Col4a4Q9QZR9 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Col4a4Q9QZR9 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.98■□□□□ 0.95
Col4a4Q9QZR9 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Col4a4Q9QZR9 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.98■□□□□ 0.95
Col4a4Q9QZR9 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Col4a4Q9QZR9 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.97■□□□□ 0.95
Col4a4Q9QZR9 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Col4a4Q9QZR9 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Col4a4Q9QZR9 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC20.97■□□□□ 0.95
Col4a4Q9QZR9 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC20.97■□□□□ 0.95
Col4a4Q9QZR9 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Col4a4Q9QZR9 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Col4a4Q9QZR9 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Col4a4Q9QZR9 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Col4a4Q9QZR9 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Col4a4Q9QZR9 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.96■□□□□ 0.95
Col4a4Q9QZR9 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Col4a4Q9QZR9 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.96■□□□□ 0.95
Col4a4Q9QZR9 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Col4a4Q9QZR9 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Col4a4Q9QZR9 Gm4968-201ENSMUST00000071458 858 ntBASIC20.96■□□□□ 0.95
Col4a4Q9QZR9 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Col4a4Q9QZR9 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Col4a4Q9QZR9 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Col4a4Q9QZR9 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Col4a4Q9QZR9 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC20.95■□□□□ 0.94
Col4a4Q9QZR9 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Col4a4Q9QZR9 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.95■□□□□ 0.94
Col4a4Q9QZR9 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Col4a4Q9QZR9 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Col4a4Q9QZR9 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Col4a4Q9QZR9 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Col4a4Q9QZR9 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Col4a4Q9QZR9 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Col4a4Q9QZR9 Gm43859-201ENSMUST00000200075 1412 ntBASIC20.94■□□□□ 0.94
Col4a4Q9QZR9 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Col4a4Q9QZR9 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Col4a4Q9QZR9 Mir5133-201ENSMUST00000174955 77 ntBASIC20.94■□□□□ 0.94
Col4a4Q9QZR9 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Col4a4Q9QZR9 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Col4a4Q9QZR9 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Col4a4Q9QZR9 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Col4a4Q9QZR9 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Col4a4Q9QZR9 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Col4a4Q9QZR9 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Col4a4Q9QZR9 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Col4a4Q9QZR9 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Col4a4Q9QZR9 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Col4a4Q9QZR9 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Col4a4Q9QZR9 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Col4a4Q9QZR9 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Col4a4Q9QZR9 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Col4a4Q9QZR9 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Col4a4Q9QZR9 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Col4a4Q9QZR9 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Col4a4Q9QZR9 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Col4a4Q9QZR9 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Col4a4Q9QZR9 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Col4a4Q9QZR9 Gm42555-201ENSMUST00000199304 1039 ntBASIC20.91■□□□□ 0.94
Col4a4Q9QZR9 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Col4a4Q9QZR9 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Col4a4Q9QZR9 Gm13148-201ENSMUST00000118892 745 ntBASIC20.9■□□□□ 0.94
Col4a4Q9QZR9 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC20.9■□□□□ 0.94
Col4a4Q9QZR9 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Col4a4Q9QZR9 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Col4a4Q9QZR9 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Col4a4Q9QZR9 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Col4a4Q9QZR9 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Col4a4Q9QZR9 Gm22325-201ENSMUST00000158904 308 ntBASIC20.89■□□□□ 0.94
Col4a4Q9QZR9 Gm20760-201ENSMUST00000179197 648 ntBASIC20.89■□□□□ 0.94
Col4a4Q9QZR9 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Col4a4Q9QZR9 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.89■□□□□ 0.94
Col4a4Q9QZR9 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Col4a4Q9QZR9 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Col4a4Q9QZR9 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Col4a4Q9QZR9 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
Col4a4Q9QZR9 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Col4a4Q9QZR9 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Col4a4Q9QZR9 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC20.89■□□□□ 0.93
Col4a4Q9QZR9 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Col4a4Q9QZR9 Gm27801-201ENSMUST00000184174 223 ntBASIC20.89■□□□□ 0.93
Col4a4Q9QZR9 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Col4a4Q9QZR9 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Col4a4Q9QZR9 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col4a4Q9QZR9 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms