Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim33Q99PP7 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Trim33Q99PP7 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim33Q99PP7 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim33Q99PP7 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim33Q99PP7 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim33Q99PP7 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim33Q99PP7 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Trim33Q99PP7 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim33Q99PP7 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.04■□□□□ 0.8
Trim33Q99PP7 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim33Q99PP7 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim33Q99PP7 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim33Q99PP7 Iqck-206ENSMUST00000208658 2891 ntBASIC20.04■□□□□ 0.8
Trim33Q99PP7 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim33Q99PP7 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.03■□□□□ 0.8
Trim33Q99PP7 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Trim33Q99PP7 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Trim33Q99PP7 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim33Q99PP7 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim33Q99PP7 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Trim33Q99PP7 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Trim33Q99PP7 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Trim33Q99PP7 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim33Q99PP7 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Trim33Q99PP7 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim33Q99PP7 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Trim33Q99PP7 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Trim33Q99PP7 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim33Q99PP7 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Trim33Q99PP7 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.02■□□□□ 0.8
Trim33Q99PP7 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim33Q99PP7 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
Trim33Q99PP7 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Trim33Q99PP7 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Trim33Q99PP7 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Trim33Q99PP7 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
Trim33Q99PP7 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim33Q99PP7 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.01■□□□□ 0.79
Trim33Q99PP7 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.01■□□□□ 0.79
Trim33Q99PP7 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Trim33Q99PP7 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim33Q99PP7 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Trim33Q99PP7 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Trim33Q99PP7 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20■□□□□ 0.79
Trim33Q99PP7 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
Trim33Q99PP7 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim33Q99PP7 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20■□□□□ 0.79
Trim33Q99PP7 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim33Q99PP7 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim33Q99PP7 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim33Q99PP7 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Trim33Q99PP7 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim33Q99PP7 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.99■□□□□ 0.79
Trim33Q99PP7 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim33Q99PP7 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
Trim33Q99PP7 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim33Q99PP7 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim33Q99PP7 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim33Q99PP7 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Trim33Q99PP7 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.98■□□□□ 0.79
Trim33Q99PP7 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Trim33Q99PP7 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim33Q99PP7 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim33Q99PP7 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim33Q99PP7 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Trim33Q99PP7 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Trim33Q99PP7 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim33Q99PP7 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.97■□□□□ 0.79
Trim33Q99PP7 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.97■□□□□ 0.79
Trim33Q99PP7 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim33Q99PP7 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim33Q99PP7 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Trim33Q99PP7 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Trim33Q99PP7 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim33Q99PP7 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim33Q99PP7 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.96■□□□□ 0.79
Trim33Q99PP7 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim33Q99PP7 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim33Q99PP7 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim33Q99PP7 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.95■□□□□ 0.78
Trim33Q99PP7 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Trim33Q99PP7 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.95■□□□□ 0.78
Trim33Q99PP7 Gm7143-201ENSMUST00000222811 859 ntBASIC19.95■□□□□ 0.78
Trim33Q99PP7 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim33Q99PP7 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim33Q99PP7 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim33Q99PP7 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.94■□□□□ 0.78
Trim33Q99PP7 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim33Q99PP7 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim33Q99PP7 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim33Q99PP7 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Trim33Q99PP7 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Trim33Q99PP7 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim33Q99PP7 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim33Q99PP7 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Trim33Q99PP7 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Trim33Q99PP7 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim33Q99PP7 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim33Q99PP7 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.94■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms