Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scrt1Q99M85 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scrt1Q99M85 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scrt1Q99M85 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Scrt1Q99M85 Wdr70-203ENSMUST00000227371 1130 ntBASIC17.78■□□□□ 0.44
Scrt1Q99M85 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scrt1Q99M85 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Scrt1Q99M85 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scrt1Q99M85 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scrt1Q99M85 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Scrt1Q99M85 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scrt1Q99M85 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scrt1Q99M85 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.77■□□□□ 0.44
Scrt1Q99M85 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.77■□□□□ 0.44
Scrt1Q99M85 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Scrt1Q99M85 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Scrt1Q99M85 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.44
Scrt1Q99M85 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Scrt1Q99M85 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Scrt1Q99M85 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Scrt1Q99M85 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Scrt1Q99M85 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Scrt1Q99M85 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Scrt1Q99M85 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Scrt1Q99M85 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scrt1Q99M85 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scrt1Q99M85 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Scrt1Q99M85 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC17.76■□□□□ 0.43
Scrt1Q99M85 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scrt1Q99M85 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.76■□□□□ 0.43
Scrt1Q99M85 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Scrt1Q99M85 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scrt1Q99M85 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scrt1Q99M85 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scrt1Q99M85 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scrt1Q99M85 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Scrt1Q99M85 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Scrt1Q99M85 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scrt1Q99M85 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scrt1Q99M85 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Scrt1Q99M85 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Scrt1Q99M85 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Scrt1Q99M85 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Scrt1Q99M85 Gm43173-201ENSMUST00000202246 593 ntBASIC17.75■□□□□ 0.43
Scrt1Q99M85 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.75■□□□□ 0.43
Scrt1Q99M85 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Scrt1Q99M85 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Scrt1Q99M85 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Scrt1Q99M85 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Scrt1Q99M85 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Scrt1Q99M85 Gm37415-201ENSMUST00000192265 2054 ntBASIC17.75■□□□□ 0.43
Scrt1Q99M85 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Scrt1Q99M85 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC17.74■□□□□ 0.43
Scrt1Q99M85 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scrt1Q99M85 Gm12251-201ENSMUST00000117893 792 ntBASIC17.74■□□□□ 0.43
Scrt1Q99M85 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Scrt1Q99M85 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC17.74■□□□□ 0.43
Scrt1Q99M85 Gm42569-201ENSMUST00000200539 472 ntBASIC17.74■□□□□ 0.43
Scrt1Q99M85 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC17.74■□□□□ 0.43
Scrt1Q99M85 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scrt1Q99M85 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scrt1Q99M85 AC153962.1-201ENSMUST00000218530 1948 ntBASIC17.73■□□□□ 0.43
Scrt1Q99M85 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Scrt1Q99M85 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.73■□□□□ 0.43
Scrt1Q99M85 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Scrt1Q99M85 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Scrt1Q99M85 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scrt1Q99M85 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Scrt1Q99M85 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scrt1Q99M85 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Scrt1Q99M85 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Scrt1Q99M85 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scrt1Q99M85 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scrt1Q99M85 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.72■□□□□ 0.43
Scrt1Q99M85 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scrt1Q99M85 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scrt1Q99M85 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Scrt1Q99M85 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC17.71■□□□□ 0.43
Scrt1Q99M85 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scrt1Q99M85 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scrt1Q99M85 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scrt1Q99M85 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.71■□□□□ 0.43
Scrt1Q99M85 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scrt1Q99M85 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scrt1Q99M85 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scrt1Q99M85 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Scrt1Q99M85 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC17.71■□□□□ 0.43
Scrt1Q99M85 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC17.71■□□□□ 0.43
Scrt1Q99M85 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Scrt1Q99M85 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scrt1Q99M85 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scrt1Q99M85 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Scrt1Q99M85 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.7■□□□□ 0.42
Scrt1Q99M85 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Scrt1Q99M85 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.7■□□□□ 0.42
Scrt1Q99M85 Gm27011-201ENSMUST00000182352 972 ntBASIC17.7■□□□□ 0.42
Scrt1Q99M85 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.7■□□□□ 0.42
Scrt1Q99M85 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Scrt1Q99M85 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Scrt1Q99M85 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms